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Q133N2

- GLGB_RHOPS

UniProt

Q133N2 - GLGB_RHOPS

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Protein
1,4-alpha-glucan branching enzyme GlgB
Gene
glgB, RPD_3484
Organism
Rhodopseudomonas palustris (strain BisB5)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei399 – 3991Nucleophile By similarity
Active sitei452 – 4521Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciRPAL316057:GHDC-3544-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:RPD_3484
OrganismiRhodopseudomonas palustris (strain BisB5)
Taxonomic identifieri316057 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeRhodopseudomonas
ProteomesiUP000001818: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7167161,4-alpha-glucan branching enzyme GlgBUniRule annotation
PRO_0000260690Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi316057.RPD_3484.

Structurei

3D structure databases

ProteinModelPortaliQ133N2.
SMRiQ133N2. Positions 112-715.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiWIERINT.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q133N2-1 [UniParc]FASTAAdd to Basket

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MTVQLTDEAY AVLEGRHADP FHYLGPHSED NRVVVRALLP DATAVEAVGE    50
HGETAHLERV HESGLFAGSL PNGSHRYQLR ARFGDTTVDL EDPYRFPPIL 100
TDFDLYLLGE GTDQRLYDKL GAHPMALEGV NGVAFVVLAP NARRVSVVGD 150
FNFWNPRRHQ MRVRGNGYWE LFVPGAAAGD HYKFDVVGPH GEQLPQKSDP 200
MAFAAELRPK TASIVVDQTR LPQPRPAPAQ INALGAPMSI YEVHLGSWRR 250
KDGEQWLSYR ELAETLPAYV REMGFTHVEF LPVSEHPFDG SWGYQPTGLY 300
APTSRFGTPE DFCALIDAFH AQGIGVLLDW VPGHFPDDPH GLGHFDGTAL 350
YEHANPLQGR HLDWGTLIYN YGRTEVVNFL VSNALFWLER YGIDGLRVDA 400
VASMLYLDYS RPADGWVPNK FGGRENIEAI DFLRRFNAEV FAKFPHVTTA 450
AEESTAWPQV SRPVEFGGLG FGYKWNMGWM HDTLNYISKD PIHRKFHHGQ 500
ILFGLHYAFS ENFILPLSHD EVVHGKRSIL GRMPGDEWQR FANLRAYYAF 550
MFAHPGKKLM FMGSEFGQER EWNHDRSLDW HLLDTPKYAG IQALVRDLNR 600
LYRTLPALHQ LDCDPFGFEW LVTDDADRNV FAWMRKGDDP RARCLVIANF 650
SPNVYEDYRV RVPFPGRWRE ALNSDSAVYG GSNVGNAGEV HTLDGLVPEL 700
SLTIPPLAAI FLTPED 716
Length:716
Mass (Da):80,980
Last modified:October 31, 2006 - v1
Checksum:i27CA7CB7801A4B1E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000283 Genomic DNA. Translation: ABE40707.1.
RefSeqiYP_570608.1. NC_007958.1.

Genome annotation databases

EnsemblBacteriaiABE40707; ABE40707; RPD_3484.
GeneIDi4023998.
KEGGirpd:RPD_3484.
PATRICi23282103. VBIRhoPal120395_3607.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000283 Genomic DNA. Translation: ABE40707.1 .
RefSeqi YP_570608.1. NC_007958.1.

3D structure databases

ProteinModelPortali Q133N2.
SMRi Q133N2. Positions 112-715.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 316057.RPD_3484.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE40707 ; ABE40707 ; RPD_3484 .
GeneIDi 4023998.
KEGGi rpd:RPD_3484.
PATRICi 23282103. VBIRhoPal120395_3607.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi WIERINT.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci RPAL316057:GHDC-3544-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BisB5.

Entry informationi

Entry nameiGLGB_RHOPS
AccessioniPrimary (citable) accession number: Q133N2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: October 31, 2006
Last modified: June 11, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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