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Q13072 (BAGE1_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 75. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
B melanoma antigen 1

Short name=B melanoma antigen
Alternative name(s):
Antigen MZ2-BA
Cancer/testis antigen 2.1
Short name=CT2.1
Gene names
Name:BAGE
Synonyms:BAGE1
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length43 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Unknown. Antigen recognized on a melanoma by autologous cytolytic T-lymphocytes.

Subcellular location

Secreted Potential.

Tissue specificity

Not expressed in normal tissues, except in testis. Expressed with significant proportion in melanomas, but also in tumors of various histological origins, such as bladder carcinomas, head and neck squamous cell carcinomas, lung and breast carcinomas. Not expressed in renal, colorectal and prostatic carcinomas, leukemias and lymphomas. More frequently expressed in metastatic melanomas than in primary melanomas.

Miscellaneous

The ancestral BAGE gene was generated by juxtacentromeric reshuffling of the MLL3 gene. The BAGE family was expanded by juxtacentromeric movement and/or acrocentric exchanges. BAGE family is composed of expressed genes that map to the juxtacentromeric regions of chromosomes 13 and 21 and of unexpressed gene fragments that scattered in the juxtacentromeric regions of several chromosomes, including chromosomes 9, 13, 18 and 21.

Sequence similarities

Belongs to the BAGE family.

Ontologies

Keywords
   Cellular componentSecreted
   Coding sequence diversityAlternative splicing
   DomainSignal
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Alternative products

This entry describes 1 isoform produced by alternative splicing. [Select]

Note: At least 6 different mRNAs, BAGE1a, BAGE1b, BAGE1c, BAGE1d, BAGE1e and BAGE1f, are produced by alternative splicing. They differ in the 3' region, but give rise to the same protein sequence.
Isoform 1 (identifier: Q13072-1)

Also known as: BAGE1a;

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1717 Potential
Chain18 – 4326B melanoma antigen 1
PRO_0000020774

Sequences

Sequence LengthMass (Da)Tools
Isoform 1 (BAGE1a) [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 36F3BBCE4012F1BB

FASTA434,810
        10         20         30         40 
MAARAVFLAL SAQLLQARLM KEESPVVSWR LEPEDGTALC FIF 

« Hide

References

« Hide 'large scale' references
[1]"BAGE: a new gene encoding an antigen recognized on human melanomas by cytolytic T lymphocytes."
Boel P., Wildmann C., Sensi M.L., Brasseur R., Renauld J.-C., Coulie P., Boon T., van der Bruggen P.
Immunity 2:167-175(1995) [PubMed: 7895173] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
Tissue: Melanoma.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
[3]"New BAGE (B melanoma antigen) genes mapping to the juxtacentromeric regions of human chromosomes 13 and 21 have a cancer/testis expression profile."
Ruault M., van der Bruggen P., Brun M.-E., Boyle S., Roizes G., De Sario A.
Eur. J. Hum. Genet. 10:833-840(2002) [PubMed: 12461691] [Abstract]
Cited for: ALTERNATIVE SPLICING.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U19180 mRNA. Translation: AAC50123.1.
AF499647 Genomic DNA. Translation: AAP30743.1.
AF527550 mRNA. Translation: AAO32670.1.
AF527551 mRNA. Translation: AAO32671.1.
AF527552 mRNA. Translation: AAO32672.1.
AF527553 mRNA. Translation: AAO32673.1.
AF527554 mRNA. Translation: AAO32674.1.
BC107038 mRNA. Translation: AAI07039.1.
IPIIPI00427292.
RefSeqNP_001178.1. NM_001187.1.
UniGeneHs.545789.
Hs.571595.
Hs.624543.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ13072.

Polymorphism databases

DMDM5915765.

Proteomic databases

PRIDEQ13072.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID574.
KEGGhsa:574.

Organism-specific databases

CTD574.
HGNCHGNC:942. BAGE.
MIM605167. gene.
neXtProtNX_Q13072.
PharmGKBPA25242.
GenAtlasSearch...

Phylogenomic databases

HOVERGENHBG050656.

Gene expression databases

ArrayExpressQ13072.
CleanExHS_BAGE.
GenevestigatorQ13072.

Family and domain databases

InterProIPR012530. BAGE.
[Graphical view]
PfamPF08180. BAGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio2341.
SOURCESearch...

Entry information

Entry nameBAGE1_HUMAN
AccessionPrimary (citable) accession number: Q13072
Secondary accession number(s): A4IF47
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1999
Last sequence update: November 1, 1996
Last modified: December 14, 2011
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 13

Human chromosome 13: entries, gene names and cross-references to MIM

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families