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Protein

50S ribosomal protein L15e

Gene

rpl15e

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-202-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15eUniRule annotation
Gene namesi
Name:rpl15eUniRule annotation
Ordered Locus Names:Mbur_0192
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
Proteomesi
  • UP000001979 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 19719750S ribosomal protein L15ePRO_0000304204Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi259564.Mbur_0192.

Structurei

3D structure databases

ProteinModelPortaliQ12ZC4.
SMRiQ12ZC4. Positions 2-195.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04209. Archaea.
COG1632. LUCA.
HOGENOMiHOG000229584.
KOiK02877.
OMAiGHRYSQT.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
HAMAPiMF_00256. Ribosomal_L15e. 1 hit.
InterProiIPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020926. Ribosomal_L15e_arc.
IPR012678. Ribosomal_L23/L15e_core_dom.
[Graphical view]
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiPF00827. Ribosomal_L15e. 1 hit.
[Graphical view]
SMARTiSM01384. Ribosomal_L15e. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12ZC4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKSFYGYIR DAWKNPDETY VRDLRWERLQ VWRKEGSVTR VERPTRIDRA
60 70 80 90 100
RSLGYKAKQG IVVARVKVRR GSMRKSRYIR GRRTQHTGKN KITVGKSIQR
110 120 130 140 150
ISEERAARKY PNMEVLNSYW VGEDGKQKWY EVILVDPSHP VIKSDKNLNW
160 170 180 190
ICGKAHSGRV FRGKTSAGRK GRGMQTRGTG TEKTRPSVRS NLNRSKK
Length:197
Mass (Da):22,967
Last modified:August 22, 2006 - v1
Checksum:iEC7BEE9D137A8CD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE51202.1.
RefSeqiWP_011498364.1. NC_007955.1.

Genome annotation databases

EnsemblBacteriaiABE51202; ABE51202; Mbur_0192.
GeneIDi3997159.
KEGGimbu:Mbur_0192.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE51202.1.
RefSeqiWP_011498364.1. NC_007955.1.

3D structure databases

ProteinModelPortaliQ12ZC4.
SMRiQ12ZC4. Positions 2-195.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi259564.Mbur_0192.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE51202; ABE51202; Mbur_0192.
GeneIDi3997159.
KEGGimbu:Mbur_0192.

Phylogenomic databases

eggNOGiarCOG04209. Archaea.
COG1632. LUCA.
HOGENOMiHOG000229584.
KOiK02877.
OMAiGHRYSQT.

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-202-MONOMER.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
HAMAPiMF_00256. Ribosomal_L15e. 1 hit.
InterProiIPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020926. Ribosomal_L15e_arc.
IPR012678. Ribosomal_L23/L15e_core_dom.
[Graphical view]
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiPF00827. Ribosomal_L15e. 1 hit.
[Graphical view]
SMARTiSM01384. Ribosomal_L15e. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRL15E_METBU
AccessioniPrimary (citable) accession number: Q12ZC4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: August 22, 2006
Last modified: September 7, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.