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Q12ZC2

- RNP3_METBU

UniProt

Q12ZC2 - RNP3_METBU

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Protein

Ribonuclease P protein component 3

Gene

rnp3

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.UniRule annotation

Catalytic activityi

Endonucleolytic cleavage of RNA, removing 5'-extranucleotides from tRNA precursor.UniRule annotation

GO - Molecular functioni

  1. ribonuclease P activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. tRNA 5'-leader removal Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Biological processi

tRNA processing

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-204-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease P protein component 3UniRule annotation (EC:3.1.26.5UniRule annotation)
Short name:
RNase P component 3UniRule annotation
Alternative name(s):
Rpp30UniRule annotation
Gene namesi
Name:rnp3UniRule annotation
Ordered Locus Names:Mbur_0194
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
ProteomesiUP000001979: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
  2. ribonuclease P complex Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 241241Ribonuclease P protein component 3PRO_1000046626Add
BLAST

Interactioni

Subunit structurei

Consists of a catalytic RNA component and at least 4-5 protein subunits.UniRule annotation

Protein-protein interaction databases

STRINGi259564.Mbur_0194.

Structurei

3D structure databases

ProteinModelPortaliQ12ZC2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic/archaeal RNase P protein component 3 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1603.
HOGENOMiHOG000229552.
KOiK03539.
OMAiDACVFPY.

Family and domain databases

HAMAPiMF_00756. RNase_P_3.
InterProiIPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view]
PANTHERiPTHR13031. PTHR13031. 1 hit.
PfamiPF01876. RNase_P_p30. 1 hit.
[Graphical view]
SUPFAMiSSF89550. SSF89550. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12ZC2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAERSFYDLS IHYVPDGKNT AEELISMAKH LGFAGIGLSN HSTAEGPLKS
60 70 80 90 100
DGTEGFDIFR TVELVASNPS KLHGLVGKYR NKVDVLAVHG GDEGINRAAV
110 120 130 140 150
ENSNVDILIH PFTPKGSGLN HVLAKSASEN NVAIAFDIDS LIMSRGGRRV
160 170 180 190 200
HSLSHFRDYL ALSRKYDVPM LLTSNALSIF GLRAPREIIA LAALFGMEKD
210 220 230 240
EAIMALSETP LKIVQKKRHD KNYVCEGVEI FEPSPSVLGD E
Length:241
Mass (Da):26,256
Last modified:August 22, 2006 - v1
Checksum:i2684C2338107F084
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000300 Genomic DNA. Translation: ABE51204.1.
RefSeqiWP_011498366.1. NC_007955.1.
YP_564954.1. NC_007955.1.

Genome annotation databases

EnsemblBacteriaiABE51204; ABE51204; Mbur_0194.
GeneIDi3997161.
KEGGimbu:Mbur_0194.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000300 Genomic DNA. Translation: ABE51204.1 .
RefSeqi WP_011498366.1. NC_007955.1.
YP_564954.1. NC_007955.1.

3D structure databases

ProteinModelPortali Q12ZC2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 259564.Mbur_0194.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE51204 ; ABE51204 ; Mbur_0194 .
GeneIDi 3997161.
KEGGi mbu:Mbur_0194.

Phylogenomic databases

eggNOGi COG1603.
HOGENOMi HOG000229552.
KOi K03539.
OMAi DACVFPY.

Enzyme and pathway databases

BioCyci MBUR259564:GHBZ-204-MONOMER.

Family and domain databases

HAMAPi MF_00756. RNase_P_3.
InterProi IPR016195. Pol/histidinol_Pase-like.
IPR023539. RNase_P_comp-3_arc.
IPR002738. RNase_P_p30.
[Graphical view ]
PANTHERi PTHR13031. PTHR13031. 1 hit.
Pfami PF01876. RNase_P_p30. 1 hit.
[Graphical view ]
SUPFAMi SSF89550. SSF89550. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6242 / NBRC 107633 / OCM 468 / ACE-M.

Entry informationi

Entry nameiRNP3_METBU
AccessioniPrimary (citable) accession number: Q12ZC2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 22, 2006
Last modified: October 29, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3