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Protein

30S ribosomal protein S6e

Gene

rps6e

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-234-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6eUniRule annotation
Gene namesi
Name:rps6eUniRule annotation
Ordered Locus Names:Mbur_0224
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
Proteomesi
  • UP000001979 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13513530S ribosomal protein S6ePRO_0000258622Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi259564.Mbur_0224.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S6e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000226356.
KOiK02991.
OMAiEQDANRF.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12Z92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADFKIVVSD PKTKTYQFDI TGAEANQFIG RSIGQTVDGA TVGLDGYTLT
60 70 80 90 100
ITGGTDNSGF VMSPTLPGPR RQKVLIANGV GYSAVAKGVR RRKFLRGSEV
110 120 130
APDITQINTK VTGYSDKAIE EILGGGSEEV EAPAE
Length:135
Mass (Da):14,241
Last modified:August 22, 2006 - v1
Checksum:iBEE2748E3352635C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE51234.1.
RefSeqiWP_011498396.1. NC_007955.1.

Genome annotation databases

EnsemblBacteriaiABE51234; ABE51234; Mbur_0224.
GeneIDi3997660.
KEGGimbu:Mbur_0224.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE51234.1.
RefSeqiWP_011498396.1. NC_007955.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi259564.Mbur_0224.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE51234; ABE51234; Mbur_0224.
GeneIDi3997660.
KEGGimbu:Mbur_0224.

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000226356.
KOiK02991.
OMAiEQDANRF.

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-234-MONOMER.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiIPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
[Graphical view]
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiPF01092. Ribosomal_S6e. 1 hit.
[Graphical view]
SMARTiSM01405. Ribosomal_S6e. 1 hit.
[Graphical view]
PROSITEiPS00578. RIBOSOMAL_S6E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS6E_METBU
AccessioniPrimary (citable) accession number: Q12Z92
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: August 22, 2006
Last modified: May 11, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.