Q12XU6 (Q12XU6_METBU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170

Alternative name(s):
Phosphoriboisomerase A HAMAP MF_00170

Gene names

Name:	rpiA HAMAP MF_00170
Ordered Locus Names:	Mbur_0773

Organism

Methanococcoides burtonii (strain DSM 6242) [Complete proteome] [HAMAP]

Taxonomic identifier

259564 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanococcoides

Protein attributes

Sequence length	231 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family. HAMAP MF_00170

Ontologies

Keywords
Molecular function	Isomerase HAMAP MF_00170 EMBL ABE51730.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12XU6 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: A017DCD923B83049	FASTA	231	24,455
	10 20 30 40 50 60 MKERNANASS SEKEAAGNAA ASLVEDGMII GLGTGSTTAF AIAEVGRRVR EEGLNVLAVV 70 80 90 100 110 120 TSYQAEMLAI EAGVPLTSLA EHPVLDLAID GADQVDAKLN VIKGGGAAHT HEKVVAHSAK 130 140 150 160 170 180 RFIVVVDESK ISEELDHFVP IEVLPYAREL AKKQFIELGG KPQIRLASRK DGPVISDNGN 190 200 210 220 230 VIIDVEFGVI EDAAELSQKL STCVGVVEHG IFLNTDEVYV GMKDGSVKII N

References

[1]

"Complete sequence of Methanococcoides burtonii DSM 6242." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Kadner K., Aerts A., Dehal P., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Anderson I., Franzmann P., Thomas T., Saunders N., Cavicchioli R., Sowers K., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 6242.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000300 Genomic DNA. Translation: ABE51730.1.
RefSeq	YP_565480.1. NC_007955.1.
3D structure databases
ProteinModelPortal	Q12XU6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q12XU6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3996678.
GenomeReviews	Gene locus Mbur_0773 in contig CP000300_GR.
KEGG	mbu:Mbur_0773.
NMPDR	fig|259564.8.peg.733.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG07879.
HOGENOM	HBG515603.
OMA	GGDPEYR.
PhylomeDB	Q12XU6.
ProtClustDB	PRK00702.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q12XU6_METBU

Accession

Primary (citable) accession number: Q12XU6

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	November 16, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)