Q12VB1 (Q12VB1_METBU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
3,4-dihydroxy-2-butanone 4-phosphate synthase RuleBase RU003843

Gene names

Ordered Locus Names:

Mbur_1723

Organism

Methanococcoides burtonii (strain DSM 6242) [Complete proteome] [HAMAP]

Taxonomic identifier

259564 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanococcoides

Protein attributes

Sequence length	238 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Pathway	Cofactor biosynthesis; riboflavin biosynthesis; 2-hydroxy-3-oxobutyl phosphate from D-ribulose 5-phosphate: step 1/1. RuleBase RU003843
Sequence similarities	Belongs to the DHBP synthase family. RuleBase RU003843

Ontologies

Keywords
Biological process	Riboflavin biosynthesis RuleBase RU003843
Ligand	Manganese RuleBase RU003843 Metal-binding RuleBase RU003843
Molecular function	Lyase RuleBase RU003843 EMBL ABE52615.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	3,4-dihydroxy-2-butanone-4-phosphate synthase activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12VB1 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 964E56BC7CEC6B2B	FASTA	238	26,378
	10 20 30 40 50 60 MTNENYTDNI KKAIKAAQNG EMFFIYDSDS REGETDFVIT ASSVTPDDVR WMRRDGGGLI 70 80 90 100 110 120 CVAIDSENSK KLGLPFISDV LRDEAKANPA LGNTVEKGGD LAYDTRSSFS IWVNHRKTRT 130 140 150 160 170 180 GIPDNDRALT INELSNITEK CMKGEDVIFG SEFRTPGHVA LLRAADHLVH DRKGQTELSI 190 200 210 220 230 AIAKMADVTP AMVVCEMLDD SNGRALSKKD AKEYAELHGL VFLEGQEIVD AYEQWEQA

References

[1]

"Complete sequence of Methanococcoides burtonii DSM 6242." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Kadner K., Aerts A., Dehal P., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Anderson I., Franzmann P., Thomas T., Saunders N., Cavicchioli R., Sowers K., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 6242.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000300 Genomic DNA. Translation: ABE52615.1.
RefSeq	YP_566365.1. NC_007955.1.
3D structure databases
ProteinModelPortal	Q12VB1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q12VB1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3997398.
GenomeReviews	Gene locus Mbur_1723 in contig CP000300_GR.
KEGG	mbu:Mbur_1723.
NMPDR	fig|259564.8.peg.1642.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG05755.
HOGENOM	HBG735778.
OMA	GDMIFAA.
ProtClustDB	CLSK634377.
Family and domain databases
InterPro	IPR017945. DHBP_synth_RibB-like_a/b_dom. IPR000422. DHBP_synthase_RibB. [Graphical view]
Gene3D	G3DSA:3.90.870.10. DHBP_synth_RibB-like_a/b_dom. 1 hit.
KO	K02858.
Pfam	PF00926. DHBP_synthase. 1 hit. [Graphical view]
SUPFAM	SSF55821. DHBP_synth_RibB-like_a/b_dom. 1 hit.
TIGRFAMs	TIGR00506. RibB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q12VB1_METBU

Accession

Primary (citable) accession number: Q12VB1

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	November 16, 2011
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)