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Q12V78

- Q12V78_METBU

UniProt

Q12V78 - Q12V78_METBU

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Protein
Submitted name:

Protein with ATP dependent DNA ligase domain

Gene

Mbur_1758

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-1788-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein with ATP dependent DNA ligase domainImported
Gene namesi
Ordered Locus Names:Mbur_1758Imported
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)Imported
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
ProteomesiUP000001979: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi259564.Mbur_1758.

Structurei

3D structure databases

ProteinModelPortaliQ12V78.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12V78-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGFPKIHRAM LLKPAIEAHF SDVETVCVEE KMNGFNVRIV TVDGKIIAIT
60 70 80 90 100
RGGYVCPYST ERAQKFLNID FFEEHPELVL HGEMVGPDNP YIPKKIYNVE
110 120 130 140 150
SLELFVFDIR HKHSGIPLPL HERRQLAEEY GFTQVRLFGE FPKEEAPLRI
160 170 180 190 200
SEIIRELGKI EHEGVIIKDP MMEIAPLKYT CSQSNCADLK HAFKFYNDAG
210 220 230 240 250
RDYLFSRVVR EGFQAVEWEE TGDDIDKRCL QLGRSILYPM IDSIVNIGNG
260 270 280 290 300
VRLADEVQMR LSNLETVSKF KEYLRRQGID AIFSEPEVVG DEFIVKIKKL
310
NKSTNDKTLS MWKGETW
Length:317
Mass (Da):36,548
Last modified:August 22, 2006 - v1
Checksum:iA522B3458B852593
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE52648.1.
RefSeqiWP_011499791.1. NC_007955.1.
YP_566398.1. NC_007955.1.

Genome annotation databases

EnsemblBacteriaiABE52648; ABE52648; Mbur_1758.
GeneIDi3997318.
KEGGimbu:Mbur_1758.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE52648.1 .
RefSeqi WP_011499791.1. NC_007955.1.
YP_566398.1. NC_007955.1.

3D structure databases

ProteinModelPortali Q12V78.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 259564.Mbur_1758.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE52648 ; ABE52648 ; Mbur_1758 .
GeneIDi 3997318.
KEGGi mbu:Mbur_1758.

Phylogenomic databases

eggNOGi COG1423.
HOGENOMi HOG000224394.
KOi K07468.
OMAi EEKMNGY.

Enzyme and pathway databases

BioCyci MBUR259564:GHBZ-1788-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6242 / NBRC 107633 / OCM 468 / ACE-MImported.

Entry informationi

Entry nameiQ12V78_METBU
AccessioniPrimary (citable) accession number: Q12V78
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: October 1, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3