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Protein
Submitted name:

Protein with ATP dependent DNA ligase domain

Gene

Mbur_1758

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Protein with ATP dependent DNA ligase domainImported
Gene namesi
Ordered Locus Names:Mbur_1758Imported
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)Imported
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
Proteomesi
  • UP000001979 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi259564.Mbur_1758

Structurei

3D structure databases

ProteinModelPortaliQ12V78
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 172RNA_ligaseInterPro annotationAdd BLAST148

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

Q12V78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGFPKIHRAM LLKPAIEAHF SDVETVCVEE KMNGFNVRIV TVDGKIIAIT
60 70 80 90 100
RGGYVCPYST ERAQKFLNID FFEEHPELVL HGEMVGPDNP YIPKKIYNVE
110 120 130 140 150
SLELFVFDIR HKHSGIPLPL HERRQLAEEY GFTQVRLFGE FPKEEAPLRI
160 170 180 190 200
SEIIRELGKI EHEGVIIKDP MMEIAPLKYT CSQSNCADLK HAFKFYNDAG
210 220 230 240 250
RDYLFSRVVR EGFQAVEWEE TGDDIDKRCL QLGRSILYPM IDSIVNIGNG
260 270 280 290 300
VRLADEVQMR LSNLETVSKF KEYLRRQGID AIFSEPEVVG DEFIVKIKKL
310
NKSTNDKTLS MWKGETW
Length:317
Mass (Da):36,548
Last modified:August 22, 2006 - v1
Checksum:iA522B3458B852593
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA Translation: ABE52648.1

Genome annotation databases

EnsemblBacteriaiABE52648; ABE52648; Mbur_1758
KEGGimbu:Mbur_1758

Similar proteinsi

Entry informationi

Entry nameiQ12V78_METBU
AccessioniPrimary (citable) accession number: Q12V78
Entry historyiIntegrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: March 28, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health