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Q12V78 (Q12V78_METBU) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mbur_1758 EMBL ABE52648.1
OrganismMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) [Complete proteome] [HAMAP] EMBL ABE52648.1
Taxonomic identifier259564 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides

Protein attributes

Sequence length317 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABE52648.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q12V78 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: A522B3458B852593

FASTA31736,548
        10         20         30         40         50         60 
MGFPKIHRAM LLKPAIEAHF SDVETVCVEE KMNGFNVRIV TVDGKIIAIT RGGYVCPYST 

        70         80         90        100        110        120 
ERAQKFLNID FFEEHPELVL HGEMVGPDNP YIPKKIYNVE SLELFVFDIR HKHSGIPLPL 

       130        140        150        160        170        180 
HERRQLAEEY GFTQVRLFGE FPKEEAPLRI SEIIRELGKI EHEGVIIKDP MMEIAPLKYT 

       190        200        210        220        230        240 
CSQSNCADLK HAFKFYNDAG RDYLFSRVVR EGFQAVEWEE TGDDIDKRCL QLGRSILYPM 

       250        260        270        280        290        300 
IDSIVNIGNG VRLADEVQMR LSNLETVSKF KEYLRRQGID AIFSEPEVVG DEFIVKIKKL 

       310 
NKSTNDKTLS MWKGETW 

« Hide

References

[1]"Complete sequence of Methanococcoides burtonii DSM 6242."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Kadner K., Aerts A., Dehal P., Pitluck S., Martinez M., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Anderson I., Franzmann P., Thomas T., Saunders N., Cavicchioli R., Sowers K., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 6242 / NBRC 107633 / OCM 468 / ACE-M.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000300 Genomic DNA. Translation: ABE52648.1.
RefSeqYP_566398.1. NC_007955.1.

3D structure databases

ProteinModelPortalQ12V78.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING259564.Mbur_1758.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE52648; ABE52648; Mbur_1758.
GeneID3997318.
KEGGmbu:Mbur_1758.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1423.
HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycMBUR259564:GHBZ-1788-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ12V78_METBU
AccessionPrimary (citable) accession number: Q12V78
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: May 14, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)