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Protein
Submitted name:

Protein with ATP dependent DNA ligase domain

Gene

Mbur_1758

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-1788-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein with ATP dependent DNA ligase domainImported
Gene namesi
Ordered Locus Names:Mbur_1758Imported
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)Imported
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
ProteomesiUP000001979 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi259564.Mbur_1758.

Structurei

3D structure databases

ProteinModelPortaliQ12V78.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiICPFTTK.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12V78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGFPKIHRAM LLKPAIEAHF SDVETVCVEE KMNGFNVRIV TVDGKIIAIT
60 70 80 90 100
RGGYVCPYST ERAQKFLNID FFEEHPELVL HGEMVGPDNP YIPKKIYNVE
110 120 130 140 150
SLELFVFDIR HKHSGIPLPL HERRQLAEEY GFTQVRLFGE FPKEEAPLRI
160 170 180 190 200
SEIIRELGKI EHEGVIIKDP MMEIAPLKYT CSQSNCADLK HAFKFYNDAG
210 220 230 240 250
RDYLFSRVVR EGFQAVEWEE TGDDIDKRCL QLGRSILYPM IDSIVNIGNG
260 270 280 290 300
VRLADEVQMR LSNLETVSKF KEYLRRQGID AIFSEPEVVG DEFIVKIKKL
310
NKSTNDKTLS MWKGETW
Length:317
Mass (Da):36,548
Last modified:August 22, 2006 - v1
Checksum:iA522B3458B852593
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE52648.1.
RefSeqiWP_011499791.1. NC_007955.1.
YP_566398.1. NC_007955.1.

Genome annotation databases

EnsemblBacteriaiABE52648; ABE52648; Mbur_1758.
GeneIDi3997318.
KEGGimbu:Mbur_1758.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE52648.1.
RefSeqiWP_011499791.1. NC_007955.1.
YP_566398.1. NC_007955.1.

3D structure databases

ProteinModelPortaliQ12V78.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi259564.Mbur_1758.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE52648; ABE52648; Mbur_1758.
GeneIDi3997318.
KEGGimbu:Mbur_1758.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiICPFTTK.

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-1788-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6242 / NBRC 107633 / OCM 468 / ACE-MImported.

Entry informationi

Entry nameiQ12V78_METBU
AccessioniPrimary (citable) accession number: Q12V78
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: July 22, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.