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Q12V78

- Q12V78_METBU

UniProt

Q12V78 - Q12V78_METBU

Protein
Submitted name:

Protein with ATP dependent DNA ligase domain

Gene

Mbur_1758

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 45 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMBUR259564:GHBZ-1788-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein with ATP dependent DNA ligase domainImported
    Gene namesi
    Ordered Locus Names:Mbur_1758Imported
    OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)Imported
    Taxonomic identifieri259564 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
    ProteomesiUP000001979: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi259564.Mbur_1758.

    Structurei

    3D structure databases

    ProteinModelPortaliQ12V78.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1423.
    HOGENOMiHOG000224394.
    KOiK07468.
    OMAiEEKMNGY.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q12V78-1 [UniParc]FASTAAdd to Basket

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    MGFPKIHRAM LLKPAIEAHF SDVETVCVEE KMNGFNVRIV TVDGKIIAIT    50
    RGGYVCPYST ERAQKFLNID FFEEHPELVL HGEMVGPDNP YIPKKIYNVE 100
    SLELFVFDIR HKHSGIPLPL HERRQLAEEY GFTQVRLFGE FPKEEAPLRI 150
    SEIIRELGKI EHEGVIIKDP MMEIAPLKYT CSQSNCADLK HAFKFYNDAG 200
    RDYLFSRVVR EGFQAVEWEE TGDDIDKRCL QLGRSILYPM IDSIVNIGNG 250
    VRLADEVQMR LSNLETVSKF KEYLRRQGID AIFSEPEVVG DEFIVKIKKL 300
    NKSTNDKTLS MWKGETW 317
    Length:317
    Mass (Da):36,548
    Last modified:August 22, 2006 - v1
    Checksum:iA522B3458B852593
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000300 Genomic DNA. Translation: ABE52648.1.
    RefSeqiWP_011499791.1. NC_007955.1.
    YP_566398.1. NC_007955.1.

    Genome annotation databases

    EnsemblBacteriaiABE52648; ABE52648; Mbur_1758.
    GeneIDi3997318.
    KEGGimbu:Mbur_1758.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000300 Genomic DNA. Translation: ABE52648.1 .
    RefSeqi WP_011499791.1. NC_007955.1.
    YP_566398.1. NC_007955.1.

    3D structure databases

    ProteinModelPortali Q12V78.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 259564.Mbur_1758.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE52648 ; ABE52648 ; Mbur_1758 .
    GeneIDi 3997318.
    KEGGi mbu:Mbur_1758.

    Phylogenomic databases

    eggNOGi COG1423.
    HOGENOMi HOG000224394.
    KOi K07468.
    OMAi EEKMNGY.

    Enzyme and pathway databases

    BioCyci MBUR259564:GHBZ-1788-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 6242 / NBRC 107633 / OCM 468 / ACE-MImported.

    Entry informationi

    Entry nameiQ12V78_METBU
    AccessioniPrimary (citable) accession number: Q12V78
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 45 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3