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Protein

Putative HTH-type transcriptional regulatory protein Mbur_1811

Gene

Mbur_1811

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi143 – 162H-T-H motifUniRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciMBUR259564:G1G6A-1897-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative HTH-type transcriptional regulatory protein Mbur_1811UniRule annotation
Gene namesi
Ordered Locus Names:Mbur_1811
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
Proteomesi
  • UP000001979 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002593571 – 323Putative HTH-type transcriptional regulatory protein Mbur_1811Add BLAST323

Proteomic databases

PRIDEiQ12V29

Interactioni

Protein-protein interaction databases

STRINGi259564.Mbur_1811

Structurei

3D structure databases

ProteinModelPortaliQ12V29
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini132 – 190HTH cro/C1-typeUniRule annotationAdd BLAST59

Phylogenomic databases

eggNOGiarCOG04152 Archaea
COG1395 LUCA
HOGENOMiHOG000230106
KOiK07728
OMAiGVVYFRH
OrthoDBiPOG093Z05RI

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
HAMAPiMF_00584 HTH_type_cro_C1, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
IPR020886 Tscrpt_reg_HTH_Cro/C1
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit

Sequencei

Sequence statusi: Complete.

Q12V29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKDILIHQI IEVLERAGFM VSNQCNIRPR SFDLAARQGN TLLFCKVLYN
60 70 80 90 100
IDGLNEETAR EMKSLAKYLN GYPILIGAKT RDQLLEDSVV YMRYDIPALS
110 120 130 140 150
IQTLYDYFVE NVPPLVSAAP GGLYVSIDGD VLKEARMNVS MSLGALASEL
160 170 180 190 200
GVSRRTISKY EEGQMDASID IVLHLEEILD MALAKSIDIL RSFEKELDPA
210 220 230 240 250
NVKEEAHEMK TPPNDNILNL IYTLGYDVLS TNQAPFKAVS KDTSSTFLTG
260 270 280 290 300
VSEYSNAMVK RAHLMSSISN VIETQSVFII EGKSRYKFVE DTVLIERDEL
310 320
NTIADSDDLD TLIHERAKRH KEE
Length:323
Mass (Da):36,266
Last modified:August 22, 2006 - v1
Checksum:iBDED9B3AC803C2EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA Translation: ABE52697.1
RefSeqiWP_011499840.1, NC_007955.1

Genome annotation databases

EnsemblBacteriaiABE52697; ABE52697; Mbur_1811
GeneIDi3997938
KEGGimbu:Mbur_1811

Similar proteinsi

Entry informationi

Entry nameiY1811_METBU
AccessioniPrimary (citable) accession number: Q12V29
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: August 22, 2006
Last modified: May 23, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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