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Protein

UPF0219 protein Mbur_1932

Gene

Mbur_1932

Organism
Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-1967-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0219 protein Mbur_1932UniRule annotation
Gene namesi
Ordered Locus Names:Mbur_1932
OrganismiMethanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
Taxonomic identifieri259564 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanococcoides
Proteomesi
  • UP000001979 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 349349UPF0219 protein Mbur_1932PRO_1000068440Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi259564.Mbur_1932.

Structurei

3D structure databases

ProteinModelPortaliQ12UR3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0219 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01767. Archaea.
COG3425. LUCA.
HOGENOMiHOG000223205.
KOiK01641.
OMAiIVTYGSY.

Family and domain databases

Gene3Di3.40.47.10. 2 hits.
HAMAPiMF_01409. UPF0219.
InterProiIPR013747. ACP_syn_III_C.
IPR004656. FabH-rel.
IPR016039. Thiolase-like.
[Graphical view]
PfamiPF08541. ACP_syn_III_C. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 2 hits.
TIGRFAMsiTIGR00748. HMG_CoA_syn_Arc. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12UR3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVGIVSYGA YIPKFRIKVE DIARVWGDDA DILSAGLMVY EKSVPDLDED
60 70 80 90 100
TATIAVEAAR SAVLRNNIDA KRIGAVYTGS ESHPYAVKPT STIVAEAIEA
110 120 130 140 150
TPVLTAADFE FACKAGTAAM QACMGLVGSG MVDLGMAIGA DVSQGAPGDA
160 170 180 190 200
LEYTAAAGGV SYIIGNKESE MIAVIEDTFS FTTDTPDFWR REGMPYPEHG
210 220 230 240 250
GRFTGEPGYF KHVTGAANGL MEKMGTKPSD YDYAVFHQPN GKFPSRVAKM
260 270 280 290 300
LGFTKEQIKP GLVVPWLGNT YSGSCMMGIA ATLDQAKPGD RIFATAFGSG
310 320 330 340
AGGDAFSFRV TDKIDEVRDA APKVLDLLKD PVYMDYAMYA KHKGKIRLA
Length:349
Mass (Da):37,229
Last modified:August 22, 2006 - v1
Checksum:iEA8CB8EFADDF09D8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE52813.1.
RefSeqiWP_011499955.1. NC_007955.1.

Genome annotation databases

EnsemblBacteriaiABE52813; ABE52813; Mbur_1932.
GeneIDi3997833.
KEGGimbu:Mbur_1932.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000300 Genomic DNA. Translation: ABE52813.1.
RefSeqiWP_011499955.1. NC_007955.1.

3D structure databases

ProteinModelPortaliQ12UR3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi259564.Mbur_1932.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE52813; ABE52813; Mbur_1932.
GeneIDi3997833.
KEGGimbu:Mbur_1932.

Phylogenomic databases

eggNOGiarCOG01767. Archaea.
COG3425. LUCA.
HOGENOMiHOG000223205.
KOiK01641.
OMAiIVTYGSY.

Enzyme and pathway databases

BioCyciMBUR259564:GHBZ-1967-MONOMER.

Family and domain databases

Gene3Di3.40.47.10. 2 hits.
HAMAPiMF_01409. UPF0219.
InterProiIPR013747. ACP_syn_III_C.
IPR004656. FabH-rel.
IPR016039. Thiolase-like.
[Graphical view]
PfamiPF08541. ACP_syn_III_C. 1 hit.
[Graphical view]
SUPFAMiSSF53901. SSF53901. 2 hits.
TIGRFAMsiTIGR00748. HMG_CoA_syn_Arc. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6242 / NBRC 107633 / OCM 468 / ACE-M.

Entry informationi

Entry nameiY1932_METBU
AccessioniPrimary (citable) accession number: Q12UR3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: August 22, 2006
Last modified: July 6, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.