ID   RLMF_SHEDO              Reviewed;         360 AA.
AC   Q12T32;
DT   02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   22-AUG-2006, sequence version 1.
DT   16-JUN-2009, entry version 21.
DE   RecName: Full=Ribosomal RNA large subunit methyltransferase F;
DE            EC=2.1.1.48;
DE   AltName: Full=23S rRNA mA1618 methyltransferase;
DE   AltName: Full=rRNA adenine N-6-methyltransferase;
GN   Name=rlmF; OrderedLocusNames=Sden_0097;
OS   Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=318161;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A.,
RA   Richardson P.;
RT   "Complete sequence of Shewanella denitrificans OS217.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Specifically methylates the adenine in position 1618 of
CC       23S rRNA (By similarity).
CC   -!- CATALYTIC ACTIVITY: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-
CC       homocysteine + rRNA containing N(6)-methyladenine.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm (Potential).
CC   -!- SIMILARITY: Belongs to the methyltransferase superfamily.
CC       METT10D/rlmF family.
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DR   EMBL; CP000302; ABE53394.1; -; Genomic_DNA.
DR   RefSeq; YP_561117.1; -.
DR   GeneID; 4017161; -.
DR   GenomeReviews; CP000302_GR; Sden_0097.
DR   KEGG; sdn:Sden_0097; -.
DR   NMPDR; fig|318161.14.peg.90; -.
DR   HOGENOM; Q12T32; -.
DR   OMA; Q12T32; LNFGGQN.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0008988; F:rRNA (adenine-N6-)-methyltransferase activity; IEA:HAMAP.
DR   GO; GO:0000154; P:rRNA modification; IEA:InterPro.
DR   HAMAP; MF_01848; -; 1.
DR   InterPro; IPR016909; S-AdoMet-dep_MeTrfase_YbiN_prd.
DR   InterPro; IPR010286; SAM-Mtase_prd.
DR   PANTHER; PTHR13393; DUF890; 1.
DR   Pfam; PF05971; Methyltransf_10; 1.
DR   PIRSF; PIRSF029038; Mtase_YbiN_prd; 1.
PE   3: Inferred from homology;
KW   Complete proteome; Cytoplasm; Methyltransferase; rRNA processing;
KW   S-adenosyl-L-methionine; Transferase.
FT   CHAIN         1    360       Ribosomal RNA large subunit
FT                                methyltransferase F.
FT                                /FTId=PRO_0000349954.
SQ   SEQUENCE   360 AA;  39531 MW;  C67F79419E7B55C1 CRC64;
     MSKLISKQGK RPALSQSGLA KPSTSKKSSA SKNANTETAK LLTKALHPRN VHKYGYDFAA
     LSKTLPALTP FVGPNAYGNI SIDFANPDAV KQLNAALLLH HYSIRDWDIP HGYLCPPIPG
     RVDYLHYLAD LLSAPHKGKA NRNIRALDIG TGANGIYPLL GIESYSWQFV ASDIDKVSLD
     NVDEILAKNP QLAAKLSLRL QLNPKAIFNG VIEKDEYFDV SLCNPPFHRS LADANAGTQR
     KLSNLAKNRG QSQQQAVQAK VALNFGGQKA ELWCEGGEAA FLANMISESK GFAAQCLWFT
     SLVSKSENLK PCYAQLAKQG TSEVKTIEMH QGNKITRILA WSYLSLSQRQ AWAKLRDQSR
//