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Q12SS2 (Q12SS2_SHEDO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycosyl transferase, family 25 EMBL ABE53504.1
Gene names
Ordered Locus Names:Sden_0207
OrganismShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [Complete proteome] [HAMAP] EMBL ABE53504.1
Taxonomic identifier318161 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ABE53504.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlipopolysaccharide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functiontransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q12SS2 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: FCAF295D39A61B31

FASTA25629,079
        10         20         30         40         50         60 
MSFKIFVINL DSSVDRIENM QAQCSKLGIE FERVSAVRGK NLSSAEKAAV YNRDVNLAKY 

        70         80         90        100        110        120 
DKELNDGEIG CYMSHARCWE QILIQKLDYS LILEDDAILT PEITAYIAKL ADSTSEWDYI 

       130        140        150        160        170        180 
KLSHGRKPKN ILNAIDLGDG LSLGQCIKLP STTTGQFVSQ TGAKKLLQHA YPIARPIDID 

       190        200        210        220        230        240 
IQFWYEKSLR SFVVRPFPIL NGDFGSEINQ VTDRRQVDKR QFARIWQKAK FELNLLLHRG 

       250 
RLGALPQSLV KQAKTK

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References

[1]"Complete sequence of Shewanella denitrificans OS217."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000302 Genomic DNA. Translation: ABE53504.1.
RefSeqYP_561227.1. NC_007954.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGQ12SS2.

Protein family/group databases

CAZyGT25. Glycosyltransferase Family 25.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4017927.
GenomeReviewsGene locus Sden_0207 in contig CP000302_GR.
KEGGsdn:Sden_0207.
NMPDRfig|318161.14.peg.200.
PATRIC23485996. VBISheDen79529_0221.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3306.
HOGENOMHBG682497.
OMAYAYPIRM.
ProtClustDBCLSK953369.

Enzyme and pathway databases

BioCycSDEN318161:SDEN_0207-MONOMER.

Family and domain databases

InterProIPR002654. Glyco_trans_25.
[Graphical view]
KOK07270.
PfamPF01755. Glyco_transf_25. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ12SS2_SHEDO
AccessionPrimary (citable) accession number: Q12SS2
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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