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Q12SN2

- Q12SN2_SHEDO

UniProt

Q12SN2 - Q12SN2_SHEDO

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei147 – 1471UniRule annotation
    Active sitei554 – 5541UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciSDEN318161:GHKQ-261-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:Sden_0248Imported
    OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
    Taxonomic identifieri318161 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000001982: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi318161.Sden_0248.

    Structurei

    3D structure databases

    ProteinModelPortaliQ12SN2.
    SMRiQ12SN2. Positions 14-887.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238648.
    KOiK01595.
    OMAiISCQHYR.
    OrthoDBiEOG6TJ7T8.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q12SN2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSVQSKAEDA TDVYASLRAN VGQLGQILGD TMRSHLGDAF LEKVEQIRIL    50
    AKKSRQGDDG AREQMLALLT ALPDEELIPF AKAFNQFLNL ANIAEQFHTI 100
    SRNCDELVCV PDPVEQLLGR LLKHDLDKSQ LHQCLTELDI DLVLTAHPTE 150
    ISRRTLIQKY ASVVDCLTSL ENPLLTEREH SQLQLRLRQL IAQIWHTNEI 200
    RHERPTPVDE ARWGLSTIET SLWQAVPDFL RQLNDQFEQK TGLQLAKDVS 250
    PVRFSSWMGG DRDGNPFVTA RVTQEVLDRN RHAAARLYLK DIVTLMNELS 300
    MEEANAELKA LTNNSNEPYR DVLKGLRQKL RNTIDYLNER LEGHQPDIDF 350
    NSIIWEQSDL QAPLECLYQS LCDSGMRLIA HGLLLDILRR LACFGIHMLK 400
    LDIRQDAERH SDVIAELTRY LGLGDYHHWD EDEKQAFLLR ELTNRRPLLP 450
    PNWKPSPDVA EVLSTCALIS KQSPKALGSY VISMASKPSD VLTVLLLLKE 500
    SGCTYPMRVV PLFETLKDLT GAAACIKELL QIDWYRGYTK GMQEVMIGYS 550
    DSAKDAGVMA AAWAQYRAQE ELVAVCKQAG VKLTLFHGRG GTVGRGGGPA 600
    HQAILSQPPG SVDGRIRVTE QGEMIRFKFG LPKLAVQSLA LYTSAVMEAT 650
    LMPPPEPKKA WRECMQAIAD ESVLAYRGIV REEPDFVAYF RAATPEVELG 700
    KLPLGSRPAK RKVGGGIESL RAIPWIFAWS QNRLMLPAWL GAGEALSSAI 750
    EQSQLNLLQE MEREWPFFET RISMLEMVYT KAEPNLARYY ERCLVPTELH 800
    HLGDKLRARL QLGIDTVLSL TQSDELMSHT PWSRESVKLR NPYIDPLNFL 850
    QTELLARTRN EDQASEKVQL ALMLTIAGVA AGMRNTG 887
    Length:887
    Mass (Da):99,877
    Last modified:August 22, 2006 - v1
    Checksum:i98319488DEC8371D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000302 Genomic DNA. Translation: ABE53544.1.
    RefSeqiWP_011494711.1. NC_007954.1.
    YP_561267.1. NC_007954.1.

    Genome annotation databases

    EnsemblBacteriaiABE53544; ABE53544; Sden_0248.
    GeneIDi4017995.
    KEGGisdn:Sden_0248.
    PATRICi23486104. VBISheDen79529_0268.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000302 Genomic DNA. Translation: ABE53544.1 .
    RefSeqi WP_011494711.1. NC_007954.1.
    YP_561267.1. NC_007954.1.

    3D structure databases

    ProteinModelPortali Q12SN2.
    SMRi Q12SN2. Positions 14-887.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 318161.Sden_0248.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE53544 ; ABE53544 ; Sden_0248 .
    GeneIDi 4017995.
    KEGGi sdn:Sden_0248.
    PATRICi 23486104. VBISheDen79529_0268.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238648.
    KOi K01595.
    OMAi ISCQHYR.
    OrthoDBi EOG6TJ7T8.

    Enzyme and pathway databases

    BioCyci SDEN318161:GHKQ-261-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OS217 / ATCC BAA-1090 / DSM 15013Imported.

    Entry informationi

    Entry nameiQ12SN2_SHEDO
    AccessioniPrimary (citable) accession number: Q12SN2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3