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Q12SN2

- Q12SN2_SHEDO

UniProt

Q12SN2 - Q12SN2_SHEDO

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, Sden_0248
Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotationSAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei147 – 1471 By similarityUniRule annotation
Active sitei554 – 5541 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciSDEN318161:GHKQ-261-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Sden_0248Imported
OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
Taxonomic identifieri318161 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001982: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi318161.Sden_0248.

Structurei

3D structure databases

ProteinModelPortaliQ12SN2.
SMRiQ12SN2. Positions 14-887.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiISCQHYR.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q12SN2-1 [UniParc]FASTAAdd to Basket

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MSVQSKAEDA TDVYASLRAN VGQLGQILGD TMRSHLGDAF LEKVEQIRIL    50
AKKSRQGDDG AREQMLALLT ALPDEELIPF AKAFNQFLNL ANIAEQFHTI 100
SRNCDELVCV PDPVEQLLGR LLKHDLDKSQ LHQCLTELDI DLVLTAHPTE 150
ISRRTLIQKY ASVVDCLTSL ENPLLTEREH SQLQLRLRQL IAQIWHTNEI 200
RHERPTPVDE ARWGLSTIET SLWQAVPDFL RQLNDQFEQK TGLQLAKDVS 250
PVRFSSWMGG DRDGNPFVTA RVTQEVLDRN RHAAARLYLK DIVTLMNELS 300
MEEANAELKA LTNNSNEPYR DVLKGLRQKL RNTIDYLNER LEGHQPDIDF 350
NSIIWEQSDL QAPLECLYQS LCDSGMRLIA HGLLLDILRR LACFGIHMLK 400
LDIRQDAERH SDVIAELTRY LGLGDYHHWD EDEKQAFLLR ELTNRRPLLP 450
PNWKPSPDVA EVLSTCALIS KQSPKALGSY VISMASKPSD VLTVLLLLKE 500
SGCTYPMRVV PLFETLKDLT GAAACIKELL QIDWYRGYTK GMQEVMIGYS 550
DSAKDAGVMA AAWAQYRAQE ELVAVCKQAG VKLTLFHGRG GTVGRGGGPA 600
HQAILSQPPG SVDGRIRVTE QGEMIRFKFG LPKLAVQSLA LYTSAVMEAT 650
LMPPPEPKKA WRECMQAIAD ESVLAYRGIV REEPDFVAYF RAATPEVELG 700
KLPLGSRPAK RKVGGGIESL RAIPWIFAWS QNRLMLPAWL GAGEALSSAI 750
EQSQLNLLQE MEREWPFFET RISMLEMVYT KAEPNLARYY ERCLVPTELH 800
HLGDKLRARL QLGIDTVLSL TQSDELMSHT PWSRESVKLR NPYIDPLNFL 850
QTELLARTRN EDQASEKVQL ALMLTIAGVA AGMRNTG 887
Length:887
Mass (Da):99,877
Last modified:August 22, 2006 - v1
Checksum:i98319488DEC8371D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000302 Genomic DNA. Translation: ABE53544.1.
RefSeqiWP_011494711.1. NC_007954.1.
YP_561267.1. NC_007954.1.

Genome annotation databases

EnsemblBacteriaiABE53544; ABE53544; Sden_0248.
GeneIDi4017995.
KEGGisdn:Sden_0248.
PATRICi23486104. VBISheDen79529_0268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000302 Genomic DNA. Translation: ABE53544.1 .
RefSeqi WP_011494711.1. NC_007954.1.
YP_561267.1. NC_007954.1.

3D structure databases

ProteinModelPortali Q12SN2.
SMRi Q12SN2. Positions 14-887.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 318161.Sden_0248.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE53544 ; ABE53544 ; Sden_0248 .
GeneIDi 4017995.
KEGGi sdn:Sden_0248.
PATRICi 23486104. VBISheDen79529_0268.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238648.
KOi K01595.
OMAi ISCQHYR.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci SDEN318161:GHKQ-261-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Entry informationi

Entry nameiQ12SN2_SHEDO
AccessioniPrimary (citable) accession number: Q12SN2
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: September 3, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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