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Q12SN2 (Q12SN2_SHEDO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595
Ordered Locus Names:Sden_0248 EMBL ABE53544.1
OrganismShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [Complete proteome] [HAMAP] EMBL ABE53544.1
Taxonomic identifier318161 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length887 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1471 By similarity HAMAP-Rule MF_00595
Active site5541 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
Q12SN2 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 98319488DEC8371D

FASTA88799,877
        10         20         30         40         50         60 
MSVQSKAEDA TDVYASLRAN VGQLGQILGD TMRSHLGDAF LEKVEQIRIL AKKSRQGDDG 

        70         80         90        100        110        120 
AREQMLALLT ALPDEELIPF AKAFNQFLNL ANIAEQFHTI SRNCDELVCV PDPVEQLLGR 

       130        140        150        160        170        180 
LLKHDLDKSQ LHQCLTELDI DLVLTAHPTE ISRRTLIQKY ASVVDCLTSL ENPLLTEREH 

       190        200        210        220        230        240 
SQLQLRLRQL IAQIWHTNEI RHERPTPVDE ARWGLSTIET SLWQAVPDFL RQLNDQFEQK 

       250        260        270        280        290        300 
TGLQLAKDVS PVRFSSWMGG DRDGNPFVTA RVTQEVLDRN RHAAARLYLK DIVTLMNELS 

       310        320        330        340        350        360 
MEEANAELKA LTNNSNEPYR DVLKGLRQKL RNTIDYLNER LEGHQPDIDF NSIIWEQSDL 

       370        380        390        400        410        420 
QAPLECLYQS LCDSGMRLIA HGLLLDILRR LACFGIHMLK LDIRQDAERH SDVIAELTRY 

       430        440        450        460        470        480 
LGLGDYHHWD EDEKQAFLLR ELTNRRPLLP PNWKPSPDVA EVLSTCALIS KQSPKALGSY 

       490        500        510        520        530        540 
VISMASKPSD VLTVLLLLKE SGCTYPMRVV PLFETLKDLT GAAACIKELL QIDWYRGYTK 

       550        560        570        580        590        600 
GMQEVMIGYS DSAKDAGVMA AAWAQYRAQE ELVAVCKQAG VKLTLFHGRG GTVGRGGGPA 

       610        620        630        640        650        660 
HQAILSQPPG SVDGRIRVTE QGEMIRFKFG LPKLAVQSLA LYTSAVMEAT LMPPPEPKKA 

       670        680        690        700        710        720 
WRECMQAIAD ESVLAYRGIV REEPDFVAYF RAATPEVELG KLPLGSRPAK RKVGGGIESL 

       730        740        750        760        770        780 
RAIPWIFAWS QNRLMLPAWL GAGEALSSAI EQSQLNLLQE MEREWPFFET RISMLEMVYT 

       790        800        810        820        830        840 
KAEPNLARYY ERCLVPTELH HLGDKLRARL QLGIDTVLSL TQSDELMSHT PWSRESVKLR 

       850        860        870        880 
NPYIDPLNFL QTELLARTRN EDQASEKVQL ALMLTIAGVA AGMRNTG 

« Hide

References

[1]"Complete sequence of Shewanella denitrificans OS217."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000302 Genomic DNA. Translation: ABE53544.1.
RefSeqYP_561267.1. NC_007954.1.

3D structure databases

ProteinModelPortalQ12SN2.
SMRQ12SN2. Positions 14-887.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING318161.Sden_0248.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE53544; ABE53544; Sden_0248.
GeneID4017995.
KEGGsdn:Sden_0248.
PATRIC23486104. VBISheDen79529_0268.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2352.
HOGENOMHOG000238648.
KOK01595.
OMAISCQHYR.
OrthoDBEOG6TJ7T8.

Enzyme and pathway databases

BioCycSDEN318161:GHKQ-261-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ12SN2_SHEDO
AccessionPrimary (citable) accession number: Q12SN2
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: June 11, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)