Q12S79 (Q12S79_SHEDO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine-glyoxylate aminotransferase EMBL ABE53697.1
EC=2.6.1.44 EMBL ABE53697.1

Gene names

Ordered Locus Names:

Sden_0404

Organism

Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [Complete proteome] [HAMAP] EMBL ABE53697.1

Taxonomic identifier

318161 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	379 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS020578

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020578
Molecular function	Aminotransferase EMBL ABE53697.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	alanine-glyoxylate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12S79 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 9F3CE356F27102A9	FASTA	379	40,991
	10 20 30 40 50 60 MISAPTVNSF TPPRRTLMGP GPSDVYPEVL AAQARPTIGH LDPLFVGMMD ELKSLIQYAF 70 80 90 100 110 120 QTKNEMTLAI SAPGSAGMEA CFVNLVEPGE KVIVCRNGVF GERMRQNVER VGALAVVVDN 130 140 150 160 170 180 EWGEPVCPKA VEAALKANPD AKFLAFVHAE TSTGALSDAK TLCRLAQEHD CLSIVDAVTS 190 200 210 220 230 240 LGGVELLVDE WGIDAIYSGS QKCLSCVPGL SPVSFSPKAV AKLMSRKTPV QSWFLDQSLV 250 260 270 280 290 300 MGYWGNKDSG LKRSYHHTAP VNALYALHEA FRLLALEGLE NAWARHKKMH LVLAAGLEQL 310 320 330 340 350 360 GLKFVVAAEH RLPQLNAVYL PQGVDDALVR TQLLEEYNLE IGAGLGALAG KAWRIGLMGF 370 GARRENVALC LKALEEVMN

References

[1]

"Complete sequence of Shewanella denitrificans OS217." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000302 Genomic DNA. Translation: ABE53697.1.
RefSeq	YP_561420.1. NC_007954.1.
3D structure databases
ProteinModelPortal	Q12S79.
ModBase	Search...
Protein-protein interaction databases
STRING	Q12S79.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4017150.
GenomeReviews	Gene locus Sden_0404 in contig CP000302_GR.
KEGG	sdn:Sden_0404.
NMPDR	fig|318161.14.peg.395.
PATRIC	23486440. VBISheDen79529_0432.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0075.
HOGENOM	HBG700056.
OMA	MRQNVER.
PhylomeDB	Q12S79.
ProtClustDB	CLSK873957.
Enzyme and pathway databases
BioCyc	SDEN318161:SDEN_0404-MONOMER.
Family and domain databases
InterPro	IPR000192. Aminotrans_V/Cys_dSase. IPR020578. Aminotrans_V_PyrdxlP_BS. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR024169. SP_NH2Trfase/AEP_transaminase. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00830.
Pfam	PF00266. Aminotran_5. 1 hit. [Graphical view]
PIRSF	PIRSF000524. SPT. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00595. AA_TRANSFER_CLASS_5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q12S79_SHEDO

Accession

Primary (citable) accession number: Q12S79

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	January 25, 2012
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)