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Protein
Submitted name:

Uncharacterized protein

Gene

Sden_0562

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Sden_0562Imported
OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
Taxonomic identifieri318161 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001982 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi318161.Sden_0562.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2OQMX-ray1.83A/B/C/D1-173[»]
ProteinModelPortaliQ12RS4.
SMRiQ12RS4.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ12RS4.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 163DUF1993InterPro annotationAdd BLAST162

Phylogenomic databases

eggNOGiENOG4108UTA. Bacteria.
COG3812. LUCA.
HOGENOMiHOG000257431.
KOiK09983.
OMAiDMFPLVR.
OrthoDBiPOG091H0LR1.

Family and domain databases

InterProiView protein in InterPro
IPR034660. DinB/YfiT-like.
IPR018531. DUF1993.
PfamiView protein in Pfam
PF09351. DUF1993. 1 hit.
SUPFAMiSSF109854. SSF109854. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12RS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLYDLTVVQF SKMLKNLNAI FDKAEAFAEL KKVDMDVLLN SRLAADQFNL
60 70 80 90 100
IRQVQIACDT AKVGVARLTG QLETAPKHDD SETTLAELRQ RIASVLTYLE
110 120 130 140 150
GFSEADFANA ATIQISQPRW QGKYLTGYEF AIEHAIPNLY FHITTAYGIL
160 170
RHNGVEVGKK DYLGAMPYKA PIL
Length:173
Mass (Da):19,386
Last modified:August 22, 2006 - v1
Checksum:iCAC50B72B6C80D05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000302 Genomic DNA. Translation: ABE53852.1.
RefSeqiWP_011495018.1. NC_007954.1.

Genome annotation databases

EnsemblBacteriaiABE53852; ABE53852; Sden_0562.
KEGGisdn:Sden_0562.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ12RS4_SHEDO
AccessioniPrimary (citable) accession number: Q12RS4
Entry historyiIntegrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: July 5, 2017
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported