Q12Q29 (Q12Q29_SHEDO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2,3-dimethylmalate lyase EMBL ABE54447.1
EC=4.1.3.32 EMBL ABE54447.1

Gene names

Ordered Locus Names:

Sden_1161

Organism

Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [Complete proteome] [HAMAP] EMBL ABE54447.1

Taxonomic identifier

318161 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella denitrificans

Protein attributes

Sequence length	545 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABE54447.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	2,3-dimethylmalate lyase activity Inferred from electronic annotation. Source: EC phosphoenolpyruvate mutase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12Q29 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: DDE8FBF21F70BD49	FASTA	545	60,536
	10 20 30 40 50 60 MKGLYKHQNK KRTLKDILLS PTTEYLMEAH NAISAKIIEE VGFSGIWASG LTISSSLGVR 70 80 90 100 110 120 DRNEISWTQV IDAVEYMTDV VDCPILLDVD TGYGDYNSFR RVVKKLCQRN ISGCCIEDKI 130 140 150 160 170 180 FPKQNSFIGE RQELASIAEF TGKIKAGIDH RENEDFVIIA RTEALISGYG IDEALRRAEA 190 200 210 220 230 240 YYEAGADAIL IHSKSSNADE VLEFCNLFTA PCPIVIVPTK YYNTPTNVFE EAGVSTVIWA 250 260 270 280 290 300 NHSLRASVKA IRETAEIVFK EKSLVSVENK VASLAEIFRL NGEHEMEQIE KRYLQEADSS 310 320 330 340 350 360 NIIFLAASRG QYLKTLTEDR PKCLIEINGK PLLQHAINRF RSVGVNDISV VSGYKGEQIN 370 380 390 400 410 420 HYDVKNIANS EYEATGECYS LYCALSQIKK STIVAYGDLI LDGYIINQLP KNDSDADIVI 430 440 450 460 470 480 YVDKSNEQID NHDGCFVQCS SSYSPNPFEN EGVSVLAIVD ASDRLNAHGQ WIGVMKIMDK 490 500 510 520 530 540 GVARVHEALQ QLIDAGEVSA SISDLLGQLL KTGSRVKCEY VNGGWIDINT AMDLEFAKRA EAKAV

References

[1]

"Complete sequence of Shewanella denitrificans OS217." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000302 Genomic DNA. Translation: ABE54447.1.
RefSeq	YP_562170.1. NC_007954.1.
3D structure databases
ProteinModelPortal	Q12Q29.
SMR	Q12Q29. Positions 9-296.
ModBase	Search...
Protein-protein interaction databases
STRING	318161.Sden_1161.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE54447; ABE54447; Sden_1161.
GeneID	4017685.
KEGG	sdn:Sden_1161.
PATRIC	23488080. VBISheDen79529_1238.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2513.
HOGENOM	HOG000171929.
KO	K01841.
OMA	DFAWCSA.
ProtClustDB	CLSK929768.
Enzyme and pathway databases
BioCyc	SDEN318161:GHKQ-1196-MONOMER.
Family and domain databases
Gene3D	3.20.20.60. 1 hit.
InterPro	IPR025877. MobA-like_NTP_Trfase_dom. IPR012698. PEnolPyrv_PMutase_core. IPR015813. Pyrv/PenolPyrv_Kinase-like_dom. [Graphical view]
Pfam	PF12804. NTP_transf_3. 1 hit. [Graphical view]
SUPFAM	SSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
TIGRFAMs	TIGR02320. PEP_mutase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q12Q29_SHEDO

Accession

Primary (citable) accession number: Q12Q29

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	May 29, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)