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Protein
Submitted name:

2,3-dimethylmalate lyase

Gene

Sden_1161

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 2,3-dimethylmalate lyase activity Source: UniProtKB-EC
  2. phosphoenolpyruvate mutase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciSDEN318161:GHKQ-1196-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2,3-dimethylmalate lyaseImported (EC:4.1.3.32Imported)
Gene namesi
Ordered Locus Names:Sden_1161Imported
OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
Taxonomic identifieri318161 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001982 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi318161.Sden_1161.

Structurei

3D structure databases

ProteinModelPortaliQ12Q29.
SMRiQ12Q29. Positions 9-296.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2513.
HOGENOMiHOG000171929.
KOiK01841.
OMAiDFAWCSA.
OrthoDBiEOG6N947Q.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
3.90.550.10. 1 hit.
InterProiIPR025877. MobA-like_NTP_Trfase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR012698. PEnolPyrv_PMutase_core.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF12804. NTP_transf_3. 1 hit.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.
SSF53448. SSF53448. 1 hit.
TIGRFAMsiTIGR02320. PEP_mutase. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12Q29-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKGLYKHQNK KRTLKDILLS PTTEYLMEAH NAISAKIIEE VGFSGIWASG
60 70 80 90 100
LTISSSLGVR DRNEISWTQV IDAVEYMTDV VDCPILLDVD TGYGDYNSFR
110 120 130 140 150
RVVKKLCQRN ISGCCIEDKI FPKQNSFIGE RQELASIAEF TGKIKAGIDH
160 170 180 190 200
RENEDFVIIA RTEALISGYG IDEALRRAEA YYEAGADAIL IHSKSSNADE
210 220 230 240 250
VLEFCNLFTA PCPIVIVPTK YYNTPTNVFE EAGVSTVIWA NHSLRASVKA
260 270 280 290 300
IRETAEIVFK EKSLVSVENK VASLAEIFRL NGEHEMEQIE KRYLQEADSS
310 320 330 340 350
NIIFLAASRG QYLKTLTEDR PKCLIEINGK PLLQHAINRF RSVGVNDISV
360 370 380 390 400
VSGYKGEQIN HYDVKNIANS EYEATGECYS LYCALSQIKK STIVAYGDLI
410 420 430 440 450
LDGYIINQLP KNDSDADIVI YVDKSNEQID NHDGCFVQCS SSYSPNPFEN
460 470 480 490 500
EGVSVLAIVD ASDRLNAHGQ WIGVMKIMDK GVARVHEALQ QLIDAGEVSA
510 520 530 540
SISDLLGQLL KTGSRVKCEY VNGGWIDINT AMDLEFAKRA EAKAV
Length:545
Mass (Da):60,536
Last modified:August 21, 2006 - v1
Checksum:iDDE8FBF21F70BD49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000302 Genomic DNA. Translation: ABE54447.1.
RefSeqiYP_562170.1. NC_007954.1.

Genome annotation databases

EnsemblBacteriaiABE54447; ABE54447; Sden_1161.
KEGGisdn:Sden_1161.
PATRICi23488080. VBISheDen79529_1238.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000302 Genomic DNA. Translation: ABE54447.1.
RefSeqiYP_562170.1. NC_007954.1.

3D structure databases

ProteinModelPortaliQ12Q29.
SMRiQ12Q29. Positions 9-296.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318161.Sden_1161.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE54447; ABE54447; Sden_1161.
KEGGisdn:Sden_1161.
PATRICi23488080. VBISheDen79529_1238.

Phylogenomic databases

eggNOGiCOG2513.
HOGENOMiHOG000171929.
KOiK01841.
OMAiDFAWCSA.
OrthoDBiEOG6N947Q.

Enzyme and pathway databases

BioCyciSDEN318161:GHKQ-1196-MONOMER.

Family and domain databases

Gene3Di3.20.20.60. 1 hit.
3.90.550.10. 1 hit.
InterProiIPR025877. MobA-like_NTP_Trfase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR012698. PEnolPyrv_PMutase_core.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF12804. NTP_transf_3. 1 hit.
[Graphical view]
SUPFAMiSSF51621. SSF51621. 1 hit.
SSF53448. SSF53448. 1 hit.
TIGRFAMsiTIGR02320. PEP_mutase. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS217 / ATCC BAA-1090 / DSM 15013Imported.

Entry informationi

Entry nameiQ12Q29_SHEDO
AccessioniPrimary (citable) accession number: Q12Q29
Entry historyi
Integrated into UniProtKB/TrEMBL: August 21, 2006
Last sequence update: August 21, 2006
Last modified: March 31, 2015
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.