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Q12Q29 (Q12Q29_SHEDO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length545 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABE54447.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_function2,3-dimethylmalate lyase activity

Inferred from electronic annotation. Source: UniProtKB-EC

phosphoenolpyruvate mutase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q12Q29 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: DDE8FBF21F70BD49

FASTA54560,536
        10         20         30         40         50         60 
MKGLYKHQNK KRTLKDILLS PTTEYLMEAH NAISAKIIEE VGFSGIWASG LTISSSLGVR 

        70         80         90        100        110        120 
DRNEISWTQV IDAVEYMTDV VDCPILLDVD TGYGDYNSFR RVVKKLCQRN ISGCCIEDKI 

       130        140        150        160        170        180 
FPKQNSFIGE RQELASIAEF TGKIKAGIDH RENEDFVIIA RTEALISGYG IDEALRRAEA 

       190        200        210        220        230        240 
YYEAGADAIL IHSKSSNADE VLEFCNLFTA PCPIVIVPTK YYNTPTNVFE EAGVSTVIWA 

       250        260        270        280        290        300 
NHSLRASVKA IRETAEIVFK EKSLVSVENK VASLAEIFRL NGEHEMEQIE KRYLQEADSS 

       310        320        330        340        350        360 
NIIFLAASRG QYLKTLTEDR PKCLIEINGK PLLQHAINRF RSVGVNDISV VSGYKGEQIN 

       370        380        390        400        410        420 
HYDVKNIANS EYEATGECYS LYCALSQIKK STIVAYGDLI LDGYIINQLP KNDSDADIVI 

       430        440        450        460        470        480 
YVDKSNEQID NHDGCFVQCS SSYSPNPFEN EGVSVLAIVD ASDRLNAHGQ WIGVMKIMDK 

       490        500        510        520        530        540 
GVARVHEALQ QLIDAGEVSA SISDLLGQLL KTGSRVKCEY VNGGWIDINT AMDLEFAKRA 


EAKAV 

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References

[1]"Complete sequence of Shewanella denitrificans OS217."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.
Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000302 Genomic DNA. Translation: ABE54447.1.
RefSeqYP_562170.1. NC_007954.1.

3D structure databases

ProteinModelPortalQ12Q29.
SMRQ12Q29. Positions 9-296.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING318161.Sden_1161.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE54447; ABE54447; Sden_1161.
GeneID4017685.
KEGGsdn:Sden_1161.
PATRIC23488080. VBISheDen79529_1238.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2513.
HOGENOMHOG000171929.
KOK01841.
OMAFMREWGN.
OrthoDBEOG6N947Q.

Enzyme and pathway databases

BioCycSDEN318161:GHKQ-1196-MONOMER.

Family and domain databases

Gene3D3.20.20.60. 1 hit.
3.90.550.10. 1 hit.
InterProIPR025877. MobA-like_NTP_Trfase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR012698. PEnolPyrv_PMutase_core.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF12804. NTP_transf_3. 1 hit.
[Graphical view]
SUPFAMSSF51621. SSF51621. 1 hit.
SSF53448. SSF53448. 1 hit.
TIGRFAMsTIGR02320. PEP_mutase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ12Q29_SHEDO
AccessionPrimary (citable) accession number: Q12Q29
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: June 11, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)