Q12NI9 (Q12NI9_SHEDO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Riboflavin synthase, alpha subunit EMBL ABE54987.1

Gene names

Ordered Locus Names:

Sden_1703

Organism

Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [Complete proteome] [HAMAP] EMBL ABE54987.1

Taxonomic identifier

318161 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	204 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro riboflavin synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12NI9 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 9D39DCCA1A92C490	FASTA	204	22,113
	10 20 30 40 50 60 MFTGIVQAKC ELLNIEESPG LKTFEVAMTQ TLVKGLIPGA SVANNGVCLT VTKVLNDKVF 70 80 90 100 110 120 FDVMEETLAL TNLANLSLSD SINIERSLTF GSEIGGHILS GHVHCQARVS AISRTDSHYN 130 140 150 160 170 180 IEVELAPQWM NYIFYKGFVG VNGCSLTVGK VNKTGFILHL IPETLALTNL SELAVGDFVN 190 200 IEIDSQTQVI VDTVERVLAQ RGIS

References

[1]

"Complete sequence of Shewanella denitrificans OS217." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000302 Genomic DNA. Translation: ABE54987.1.
RefSeq	YP_562710.1. NC_007954.1.
3D structure databases
ProteinModelPortal	Q12NI9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q12NI9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4018181.
GenomeReviews	Gene locus Sden_1703 in contig CP000302_GR.
KEGG	sdn:Sden_1703.
NMPDR	fig|318161.14.peg.1669.
PATRIC	23489281. VBISheDen79529_1813.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0307.
HOGENOM	HBG289809.
OMA	HILSGHV.
PhylomeDB	Q12NI9.
ProtClustDB	PRK13020.
Enzyme and pathway databases
BioCyc	SDEN318161:SDEN_1703-MONOMER.
Family and domain databases
InterPro	IPR023366. ATPase_F1/A1-cplx_a_su_N. IPR001783. Lumazine-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view]
Gene3D	G3DSA:2.40.30.20. G3DSA:2.40.30.20. 2 hits.
KO	K00793.
PANTHER	PTHR21098. Lumazine_bd. 1 hit.
Pfam	PF00677. Lum_binding. 2 hits. [Graphical view]
PIRSF	PIRSF000498. Riboflavin_syn_A. 1 hit.
SUPFAM	SSF63380. Riboflavin_synthase_like_b-brl. 2 hits.
TIGRFAMs	TIGR00187. RibE. 1 hit.
PROSITE	PS51177. LUMAZINE_BIND. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q12NI9_SHEDO

Accession

Primary (citable) accession number: Q12NI9

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)