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Q12N92

- Q12N92_SHEDO

UniProt

Q12N92 - Q12N92_SHEDO

Protein
Submitted name:

Alpha amylase, catalytic region

Gene

Sden_1800

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciSDEN318161:GHKQ-1866-MONOMER.

    Protein family/group databases

    CAZyiCBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase, catalytic regionImported
    Gene namesi
    Ordered Locus Names:Sden_1800Imported
    OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
    Taxonomic identifieri318161 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000001982: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3838 PotentialImportedAdd
    BLAST
    Chaini39 – 627589 PotentialImportedPRO_5000114589Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi318161.Sden_1800.

    Structurei

    3D structure databases

    ProteinModelPortaliQ12N92.
    SMRiQ12N92. Positions 40-525.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiTWITNEL.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR015237. Alpha-amylase_C_pro.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF00686. CBM_20. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q12N92-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAASNTKIII KKRTSFRLTF ALVAGLSALG LSSSASSAEN GVMMQYFHWY    50
    TPADGKLWTQ VQQESSALAA AGFTALWLPP AYKGASGALD VGYGVYDMYD 100
    LGEFNQKGAV RTKYGTKSQY VSAINTAHTQ GLQVYGDLVF NHRGGADATE 150
    SVTAVRVARD NRDREFGADV QIDAWTRFDF TARQNQHSAF KWRWYHFDGV 200
    DWAQNLTESN IFKFRGTGKG WDWEVDTENV NYDYLMYADL DFNHPEVVQE 250
    LKDWGDWYLS QTQVDGFRLD AIKHIRYEFF NDWLDYMRAN SGKTLFTVGE 300
    FWSYDTAKLH NYINKTSGRM SLFDAPLHLN FHQASTANGN YDMRRIWDNS 350
    LMKEQPNLAV TLVENHDTQA CQALASPVND WFKPLAYAFI LLRSQGYPNV 400
    FYADYYGANY TSSDNSCNNS VITMVSHKTK IDQLLKARKD YAYGPQIDYL 450
    DHWDIIGWTR LGDTSHPKAM AVIMSDGASG TKWMNVNRTS TRFMDITGHR 500
    SETVTTNADG WGQFPVNGGS YSVWVEQATS TSTVAVTFNC NNGVTYAGQD 550
    VYVVGNQANL GNWNTAAAIK LSPTGYPSWS GTINLPMSKA IEWKCIKKSA 600
    TEVVWQGGGN NTYTTPSSGV GSTSASF 627
    Length:627
    Mass (Da):70,195
    Last modified:August 22, 2006 - v1
    Checksum:iE9D718EE376EFF11
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000302 Genomic DNA. Translation: ABE55084.1.
    RefSeqiYP_562807.1. NC_007954.1.

    Genome annotation databases

    EnsemblBacteriaiABE55084; ABE55084; Sden_1800.
    GeneIDi4018282.
    KEGGisdn:Sden_1800.
    PATRICi23489485. VBISheDen79529_1912.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000302 Genomic DNA. Translation: ABE55084.1 .
    RefSeqi YP_562807.1. NC_007954.1.

    3D structure databases

    ProteinModelPortali Q12N92.
    SMRi Q12N92. Positions 40-525.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 318161.Sden_1800.

    Protein family/group databases

    CAZyi CBM20. Carbohydrate-Binding Module Family 20.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE55084 ; ABE55084 ; Sden_1800 .
    GeneIDi 4018282.
    KEGGi sdn:Sden_1800.
    PATRICi 23489485. VBISheDen79529_1912.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi TWITNEL.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci SDEN318161:GHKQ-1866-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR015237. Alpha-amylase_C_pro.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF00686. CBM_20. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OS217 / ATCC BAA-1090 / DSM 15013Imported.

    Entry informationi

    Entry nameiQ12N92_SHEDO
    AccessioniPrimary (citable) accession number: Q12N92
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3