Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha amylase, catalytic region

Gene

Sden_1800

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Protein family/group databases

CAZyiCBM20 Carbohydrate-Binding Module Family 20
GH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic regionImported
Gene namesi
Ordered Locus Names:Sden_1800Imported
OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
Taxonomic identifieri318161 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 37Sequence analysisAdd BLAST37
ChainiPRO_500418157038 – 627Sequence analysisAdd BLAST590

Interactioni

Protein-protein interaction databases

STRINGi318161.Sden_1800

Structurei

3D structure databases

ProteinModelPortaliQ12N92
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini528 – 627CBM20InterPro annotationAdd BLAST100

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E5K Bacteria
COG0366 LUCA
HOGENOMiHOG000094847
KOiK01176
OMAiVLNHKMG
OrthoDBiPOG091H0HQ3

Family and domain databases

Gene3Di2.60.40.10, 1 hit
2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR015237 Alpha-amylase_C_pro
IPR013784 Carb-bd-like_fold
IPR002044 CBM_fam20
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF00686 CBM_20, 1 hit
PF09154 DUF1939, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM01065 CBM_2, 1 hit
SUPFAMiSSF49452 SSF49452, 1 hit
SSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS51166 CBM20, 1 hit

Sequencei

Sequence statusi: Complete.

Q12N92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASNTKIII KKRTSFRLTF ALVAGLSALG LSSSASSAEN GVMMQYFHWY
60 70 80 90 100
TPADGKLWTQ VQQESSALAA AGFTALWLPP AYKGASGALD VGYGVYDMYD
110 120 130 140 150
LGEFNQKGAV RTKYGTKSQY VSAINTAHTQ GLQVYGDLVF NHRGGADATE
160 170 180 190 200
SVTAVRVARD NRDREFGADV QIDAWTRFDF TARQNQHSAF KWRWYHFDGV
210 220 230 240 250
DWAQNLTESN IFKFRGTGKG WDWEVDTENV NYDYLMYADL DFNHPEVVQE
260 270 280 290 300
LKDWGDWYLS QTQVDGFRLD AIKHIRYEFF NDWLDYMRAN SGKTLFTVGE
310 320 330 340 350
FWSYDTAKLH NYINKTSGRM SLFDAPLHLN FHQASTANGN YDMRRIWDNS
360 370 380 390 400
LMKEQPNLAV TLVENHDTQA CQALASPVND WFKPLAYAFI LLRSQGYPNV
410 420 430 440 450
FYADYYGANY TSSDNSCNNS VITMVSHKTK IDQLLKARKD YAYGPQIDYL
460 470 480 490 500
DHWDIIGWTR LGDTSHPKAM AVIMSDGASG TKWMNVNRTS TRFMDITGHR
510 520 530 540 550
SETVTTNADG WGQFPVNGGS YSVWVEQATS TSTVAVTFNC NNGVTYAGQD
560 570 580 590 600
VYVVGNQANL GNWNTAAAIK LSPTGYPSWS GTINLPMSKA IEWKCIKKSA
610 620
TEVVWQGGGN NTYTTPSSGV GSTSASF
Length:627
Mass (Da):70,195
Last modified:August 22, 2006 - v1
Checksum:iE9D718EE376EFF11
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000302 Genomic DNA Translation: ABE55084.1

Genome annotation databases

EnsemblBacteriaiABE55084; ABE55084; Sden_1800
KEGGisdn:Sden_1800

Similar proteinsi

Entry informationi

Entry nameiQ12N92_SHEDO
AccessioniPrimary (citable) accession number: Q12N92
Entry historyiIntegrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: February 28, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health