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Q12LG2

- Q12LG2_SHEDO

UniProt

Q12LG2 - Q12LG2_SHEDO

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sden_2434

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSDEN318161:GHKQ-2517-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Sden_2434Imported
    OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
    Taxonomic identifieri318161 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000001982: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi318161.Sden_2434.

    Structurei

    3D structure databases

    ProteinModelPortaliQ12LG2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q12LG2-1 [UniParc]FASTAAdd to Basket

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    MMAQLMTSIT PRKAQASEDS MLRIFTVPED AESTLSIIEQ KLSEDLAGFL    50
    GNSIAALEKP LSEIETDFQA FQIPTAPRFV SDYTDEIMQN LVAHSVHTAA 100
    PSFIGHMTSA LPYFVLPLSK MMVGLNQNLV KIETSKAFTP LERQVLGMMH 150
    HLVFSQDGDF YQQWMHSANH SLGAFCSGGT VANITALWIA RNRLLKADGN 200
    FNGVNREGML KALRHYGFDD IAILVSERGH YSLGKAVDLL GIGRDNIISI 250
    ATTADNKVDV EAMRLAAKAL ASKNIKVMAV VGVAGTTETG NIDPLTELAA 300
    LAQELDCHFH VDAAWGGASL LSKKYRHLLK GIELADSVTI DAHKQMYVPM 350
    GAGMVLFKDP ELANAIVHHA EYILRVGSKD LGSQTLEGSR PGMAMIVHAC 400
    LQIIGLEGYE ILINNSLEKA RYFSELIKKS PDFELITEPE LCILTYRYVP 450
    STVQLAMSDA CQRQDWHALA QFNECLDGLT QFIQKHQREQ GKSFVSRTRI 500
    QPARYNRQHT TVFRVVLANP LTGLEILQGV LAEQQEIAAL DNEFLPQLLA 550
    LASA 554
    Length:554
    Mass (Da):61,051
    Last modified:August 22, 2006 - v1
    Checksum:iD88A76BE04DB46D9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000302 Genomic DNA. Translation: ABE55714.1.
    RefSeqiYP_563437.1. NC_007954.1.

    Genome annotation databases

    EnsemblBacteriaiABE55714; ABE55714; Sden_2434.
    GeneIDi4018933.
    KEGGisdn:Sden_2434.
    PATRICi23490817. VBISheDen79529_2563.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000302 Genomic DNA. Translation: ABE55714.1 .
    RefSeqi YP_563437.1. NC_007954.1.

    3D structure databases

    ProteinModelPortali Q12LG2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 318161.Sden_2434.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABE55714 ; ABE55714 ; Sden_2434 .
    GeneIDi 4018933.
    KEGGi sdn:Sden_2434.
    PATRICi 23490817. VBISheDen79529_2563.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci SDEN318161:GHKQ-2517-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OS217 / ATCC BAA-1090 / DSM 15013Imported.

    Entry informationi

    Entry nameiQ12LG2_SHEDO
    AccessioniPrimary (citable) accession number: Q12LG2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3