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Q12LG2

- Q12LG2_SHEDO

UniProt

Q12LG2 - Q12LG2_SHEDO

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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sden_2434

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSDEN318161:GHKQ-2517-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Sden_2434Imported
OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)Imported
Taxonomic identifieri318161 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000001982: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi318161.Sden_2434.

Structurei

3D structure databases

ProteinModelPortaliQ12LG2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiGMMHNLV.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

Q12LG2 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMAQLMTSIT PRKAQASEDS MLRIFTVPED AESTLSIIEQ KLSEDLAGFL
60 70 80 90 100
GNSIAALEKP LSEIETDFQA FQIPTAPRFV SDYTDEIMQN LVAHSVHTAA
110 120 130 140 150
PSFIGHMTSA LPYFVLPLSK MMVGLNQNLV KIETSKAFTP LERQVLGMMH
160 170 180 190 200
HLVFSQDGDF YQQWMHSANH SLGAFCSGGT VANITALWIA RNRLLKADGN
210 220 230 240 250
FNGVNREGML KALRHYGFDD IAILVSERGH YSLGKAVDLL GIGRDNIISI
260 270 280 290 300
ATTADNKVDV EAMRLAAKAL ASKNIKVMAV VGVAGTTETG NIDPLTELAA
310 320 330 340 350
LAQELDCHFH VDAAWGGASL LSKKYRHLLK GIELADSVTI DAHKQMYVPM
360 370 380 390 400
GAGMVLFKDP ELANAIVHHA EYILRVGSKD LGSQTLEGSR PGMAMIVHAC
410 420 430 440 450
LQIIGLEGYE ILINNSLEKA RYFSELIKKS PDFELITEPE LCILTYRYVP
460 470 480 490 500
STVQLAMSDA CQRQDWHALA QFNECLDGLT QFIQKHQREQ GKSFVSRTRI
510 520 530 540 550
QPARYNRQHT TVFRVVLANP LTGLEILQGV LAEQQEIAAL DNEFLPQLLA

LASA
Length:554
Mass (Da):61,051
Last modified:August 22, 2006 - v1
Checksum:iD88A76BE04DB46D9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000302 Genomic DNA. Translation: ABE55714.1.
RefSeqiYP_563437.1. NC_007954.1.

Genome annotation databases

EnsemblBacteriaiABE55714; ABE55714; Sden_2434.
GeneIDi4018933.
KEGGisdn:Sden_2434.
PATRICi23490817. VBISheDen79529_2563.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000302 Genomic DNA. Translation: ABE55714.1 .
RefSeqi YP_563437.1. NC_007954.1.

3D structure databases

ProteinModelPortali Q12LG2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 318161.Sden_2434.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABE55714 ; ABE55714 ; Sden_2434 .
GeneIDi 4018933.
KEGGi sdn:Sden_2434.
PATRICi 23490817. VBISheDen79529_2563.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi GMMHNLV.
OrthoDBi EOG6MSRZP.

Enzyme and pathway databases

BioCyci SDEN318161:GHKQ-2517-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS217 / ATCC BAA-1090 / DSM 15013Imported.

Entry informationi

Entry nameiQ12LG2_SHEDO
AccessioniPrimary (citable) accession number: Q12LG2
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: October 1, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3