Q12IN6 (Q12IN6_SHEDO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ketol-acid reductoisomerase EMBL ABE56690.1
EC=1.1.1.86 EMBL ABE56690.1

Gene names

Ordered Locus Names:

Sden_3415

Organism

Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) [Complete proteome] [HAMAP] EMBL ABE56690.1

Taxonomic identifier

318161 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	492 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL ABE56690.1 Oxidoreductase EMBL ABE56690.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	branched chain family amino acid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	NADP binding Inferred from electronic annotation. Source: InterPro isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW ketol-acid reductoisomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12IN6 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: A762F8DA9D839186	FASTA	492	53,953
	10 20 30 40 50 60 MANYFNSLNL RQQLAQLAQC RFMDQGEFAQ GCEHLKGWNI VILGCGAQGL NQGLNMRDSG 70 80 90 100 110 120 LNIAFALRSA AISERRASWQ KATDNGFRVG TFEALIPDAD LVLNLTPDKQ HSNVVNTIMP 130 140 150 160 170 180 LMKQGATLSY SHGFNIVEEG MQVRKDLTVI MVAPKCPGTE VREEYKRGFG VPTLIAVHPE 190 200 210 220 230 240 NDPNGDGLVI AKAYASATGG DRAGVLLSSF VAEVKSDLMG EQTILCGMLQ TGAILGYEKM 250 260 270 280 290 300 VSDGVEPGFA AKLIQQGWET VTEALKHGGI THMMDRLSNP AKIKAFDTAE ELKVLLKPLF 310 320 330 340 350 360 EKHMDDIISG EFSRNMMADW ANDDANLLRW RAETSDTGFE NAPKSQEPID EQDYFDKGIF 370 380 390 400 410 420 LVAMIKAGVE LAFDTMVAAG IVEESAYYES LHETPLIANT IARKRLYEMN VVISDTAEYG 430 440 450 460 470 480 CYLFNHAAVP LLKDYVNAMP AELLGKGLGN ISNKVDNQKL IQVNQAVRHT GVEQVGAKLR 490 GYMTQMKDIA AS

References

[1]

"Complete sequence of Shewanella denitrificans OS217." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P. Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS217 / ATCC BAA-1090 / DSM 15013.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000302 Genomic DNA. Translation: ABE56690.1.
RefSeq	YP_564413.1. NC_007954.1.
3D structure databases
ProteinModelPortal	Q12IN6.
SMR	Q12IN6. Positions 3-490.
ModBase	Search...
Protein-protein interaction databases
STRING	Q12IN6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4019963.
GenomeReviews	Gene locus Sden_3415 in contig CP000302_GR.
KEGG	sdn:Sden_3415.
NMPDR	fig|318161.14.peg.3312.
PATRIC	23492922. VBISheDen79529_3585.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0059.
HOGENOM	HBG297205.
OMA	EKHMDDI.
PhylomeDB	Q12IN6.
ProtClustDB	PRK05225.
Enzyme and pathway databases
BioCyc	SDEN318161:SDEN_3415-MONOMER.
Family and domain databases
InterPro	IPR008927. 6-PGluconate_DH_C-like. IPR013023. AcH_isomrdctse. IPR000506. AcH_isomrdctse_C. IPR013328. DH_multihelical. IPR013116. IlvN. IPR014359. KetolA_reductoisomerase_bac. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. G3DSA:1.10.1040.10. Opine_DH. 1 hit.
KO	K00053.
PANTHER	PTHR21371. AcH_isomrdctse. 1 hit. PTHR21371:SF2. PTHR21371:SF2. 1 hit.
Pfam	PF01450. IlvC. 2 hits. PF07991. IlvN. 1 hit. [Graphical view]
PIRSF	PIRSF000116. IlvC_gammaproteo. 1 hit.
SUPFAM	SSF48179. 6DGDH_C_like. 2 hits.
TIGRFAMs	TIGR00465. IlvC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q12IN6_SHEDO

Accession

Primary (citable) accession number: Q12IN6

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	January 25, 2012
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)