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Protein

tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG

Gene

mnmG

Organism
Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm5s2U34.UniRule annotation

Cofactori

FADUniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi13 – 18FADUniRule annotation6
Nucleotide bindingi273 – 287NADUniRule annotationAdd BLAST15

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

tRNA processing

Keywords - Ligandi

FAD, Flavoprotein, NAD

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGUniRule annotation
Alternative name(s):
Glucose-inhibited division protein AUniRule annotation
Gene namesi
Name:mnmGUniRule annotation
Synonyms:gidAUniRule annotation
Ordered Locus Names:Sden_3763
OrganismiShewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Taxonomic identifieri318161 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000001982 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000166711 – 629tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmGAdd BLAST629

Interactioni

Subunit structurei

Homodimer. Heterotetramer of two MnmE and two MnmG subunits.UniRule annotation

Protein-protein interaction databases

STRINGi318161.Sden_3763.

Structurei

3D structure databases

ProteinModelPortaliQ12HP0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MnmG family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12HP0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHFHERFDVI VVGGGHAGTE AALASARMGS KTLLLTHNID TLGQMSCNPA
60 70 80 90 100
IGGIGKGHLV KEIDALGGAM AIATDFAGIQ FRTLNSSKGP AVRATRAQAD
110 120 130 140 150
RALYRQKIQQ ILQSQPNLRI FQQAVDDLVV ENNQVVGVVT QMGLAFESPT
160 170 180 190 200
VVLTTGTFLS GKIHIGMQNY SGGRAGDPPA IALANRLREL PIRVGRLKTG
210 220 230 240 250
TPPRIDANSI DFSQMTEQKG DTPLPVMSFV GNVDQHPRQI SCHITHTNEK
260 270 280 290 300
THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFADK TSHQIFIEPE
310 320 330 340 350
GLSTNEIYPN GISTSLPFDV QLNLVRSIKG MENAEIIRPG YAIEYDYFDP
360 370 380 390 400
RDLKNSLETK TINGLFFAGQ INGTTGYEEA GAQGLLAGMN ASLQVQGKET
410 420 430 440 450
WCPRRDQAYL GVLVDDLSTL GTKEPYRMFT SRAEYRLLLR EDNADLRLTE
460 470 480 490 500
KGRELGLVND DRWAKFTEKR ESIELELQRL RGQWIHPNSP LLGVLNPELN
510 520 530 540 550
TPISREASFE DLLRRPEMDY QKLMSLEGFG PGLEDPSAAE QVQIQVKYSG
560 570 580 590 600
YIQRQQDEID KAIRHENSLL PLDLDYQEVP GLSNEVIAKL NNHKPDTIGQ
610 620
ASRISGITPA AISILLVHLK KRGLLRKTA
Length:629
Mass (Da):69,513
Last modified:August 22, 2006 - v1
Checksum:i72BEC3CCECB3DDF1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000302 Genomic DNA. Translation: ABE57036.1.
RefSeqiWP_011498174.1. NC_007954.1.

Genome annotation databases

EnsemblBacteriaiABE57036; ABE57036; Sden_3763.
KEGGisdn:Sden_3763.
PATRICi23493678. VBISheDen79529_3949.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000302 Genomic DNA. Translation: ABE57036.1.
RefSeqiWP_011498174.1. NC_007954.1.

3D structure databases

ProteinModelPortaliQ12HP0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi318161.Sden_3763.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE57036; ABE57036; Sden_3763.
KEGGisdn:Sden_3763.
PATRICi23493678. VBISheDen79529_3949.

Phylogenomic databases

eggNOGiENOG4107RE5. Bacteria.
COG0445. LUCA.
HOGENOMiHOG000201059.
KOiK03495.
OMAiFRPGYAI.
OrthoDBiPOG091H01O0.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
HAMAPiMF_00129. MnmG_GidA. 1 hit.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR026904. GidA-assoc_3.
IPR004416. MnmG.
IPR002218. MnmG-rel.
IPR020595. MnmG-rel_CS.
[Graphical view]
PfamiPF01134. GIDA. 1 hit.
PF13932. GIDA_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
TIGRFAMsiTIGR00136. gidA. 1 hit.
PROSITEiPS01280. GIDA_1. 1 hit.
PS01281. GIDA_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMNMG_SHEDO
AccessioniPrimary (citable) accession number: Q12HP0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: August 22, 2006
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.