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Q12HJ3 (Q12HJ3_POLSJ) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABE41999.1
Gene names
Ordered Locus Names:Bpro_0032 EMBL ABE41999.1
OrganismPolaromonas sp. (strain JS666 / ATCC BAA-500) [Complete proteome] [HAMAP] EMBL ABE41999.1
Taxonomic identifier296591 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaePolaromonas

Protein attributes

Sequence length428 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ABE41999.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q12HJ3 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: F99E6684D661C770

FASTA42845,344
        10         20         30         40         50         60 
MNADRFEATY LIETPLEPAR VAEVMAGEQS CGTFTRVEGE TDALRLRARA TVESIEELAS 

        70         80         90        100        110        120 
VNAPSLPNAL LERQGHTAPH GGPWRRARVR ISFPVANVGA NLPTLAATVS GNLYDLGEAS 

       130        140        150        160        170        180 
GLRLESMKLP AAYRAQFDRP RVGIAGTRQA TGVASGALVG TILKPNVGFS AAQTAELVGR 

       190        200        210        220        230        240 
LCAAGVDFIK DDEVCADPAH APLAKRVPAV MAVVRAHQQR TGKHVMVAFN ITDETDAMKR 

       250        260        270        280        290        300 
HADLVEREGG SCVMASLNWC GHSALQTLRR HTGLALHGHR NGYGALSRHP LLGMSFQAYQ 

       310        320        330        340        350        360 
TLWRLAGVDH MHVHGLQGKF SQPDAEVIES AHDCYTPLAD GADGFDDRVM PAFSSGQWAG 

       370        380        390        400        410        420 
TVPATWAAVQ SDDLLFMSGG GILAHPGGPA AGVASIRQAW AAARQGVALA EFAREAPELA 


AALAFFGK 

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References

[1]"Complete sequence of chromosome of Polaromonas sp. JS666."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JS666 / ATCC BAA-500.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000316 Genomic DNA. Translation: ABE41999.1.
RefSeqYP_546897.1. NC_007948.1.

3D structure databases

ProteinModelPortalQ12HJ3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING296591.Bpro_0032.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE41999; ABE41999; Bpro_0032.
GeneID4012405.
KEGGpol:Bpro_0032.
PATRIC22953084. VBIPolSp102244_0031.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OrthoDBEOG62K1SK.
ProtClustDBCLSK952754.

Enzyme and pathway databases

BioCycPSP296591:GHI4-753-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ12HJ3_POLSJ
AccessionPrimary (citable) accession number: Q12HJ3
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: January 22, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)