Q12HJ3 (Q12HJ3_POLSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit EMBL ABE41999.1
EC=4.1.1.39 EMBL ABE41999.1

Gene names

Ordered Locus Names:

Bpro_0032 EMBL ABE41999.1

Organism

Polaromonas sp. (strain JS666 / ATCC BAA-500) [Complete proteome] [HAMAP] EMBL ABE41999.1

Taxonomic identifier

296591 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Polaromonas

Protein attributes

Sequence length	428 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ABE41999.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12HJ3 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: F99E6684D661C770	FASTA	428	45,344
	10 20 30 40 50 60 MNADRFEATY LIETPLEPAR VAEVMAGEQS CGTFTRVEGE TDALRLRARA TVESIEELAS 70 80 90 100 110 120 VNAPSLPNAL LERQGHTAPH GGPWRRARVR ISFPVANVGA NLPTLAATVS GNLYDLGEAS 130 140 150 160 170 180 GLRLESMKLP AAYRAQFDRP RVGIAGTRQA TGVASGALVG TILKPNVGFS AAQTAELVGR 190 200 210 220 230 240 LCAAGVDFIK DDEVCADPAH APLAKRVPAV MAVVRAHQQR TGKHVMVAFN ITDETDAMKR 250 260 270 280 290 300 HADLVEREGG SCVMASLNWC GHSALQTLRR HTGLALHGHR NGYGALSRHP LLGMSFQAYQ 310 320 330 340 350 360 TLWRLAGVDH MHVHGLQGKF SQPDAEVIES AHDCYTPLAD GADGFDDRVM PAFSSGQWAG 370 380 390 400 410 420 TVPATWAAVQ SDDLLFMSGG GILAHPGGPA AGVASIRQAW AAARQGVALA EFAREAPELA AALAFFGK

References

[1]

"Complete sequence of chromosome of Polaromonas sp. JS666." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JS666 / ATCC BAA-500.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000316 Genomic DNA. Translation: ABE41999.1.
RefSeq	YP_546897.1. NC_007948.1.
3D structure databases
ProteinModelPortal	Q12HJ3.
ModBase	Search...
Protein-protein interaction databases
STRING	296591.Bpro_0032.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABE41999; ABE41999; Bpro_0032.
GeneID	4012405.
KEGG	pol:Bpro_0032.
PATRIC	22953084. VBIPolSp102244_0031.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1850.
HOGENOM	HOG000230831.
KO	K01601.
OMA	FNISDET.
ProtClustDB	CLSK952754.
Enzyme and pathway databases
BioCyc	PSP296591:GHI4-753-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR020878. RuBisCo_large_chain_AS. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
PROSITE	PS00157. RUBISCO_LARGE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q12HJ3_POLSJ

Accession

Primary (citable) accession number: Q12HJ3

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)