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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

Bpro_0093

Organism
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPSP296591:GHI4-814-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Bpro_0093Imported
OrganismiPolaromonas sp. (strain JS666 / ATCC BAA-500)Imported
Taxonomic identifieri296591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaePolaromonas
ProteomesiUP000001983: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi296591.Bpro_0093.

Structurei

3D structure databases

ProteinModelPortaliQ12HD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFCQEAIE.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12HD2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSERIHATYW LETGDDPRRA AEVIAGEQSS GTFITLPNET PALKARSGAR
60 70 80 90 100
IERLEVLEQV GQPSLPVATP AKVYTRCTLE LSWPIENLGP SLPNLMSTIA
110 120 130 140 150
GNLFELRQVS GLRVLDLKLP ASFAAAYPGP AFGIAGTRRL SGVAQGPLIG
160 170 180 190 200
TIIKPSVGLD PAQTAEQVRQ LIDGGIDFIK DDELQADGPH CPFDERVRAV
210 220 230 240 250
MQVVNDAAQR DGRKVMVAFN LTGDLDQMRR RHDLVQSLGG TCVMASLNSI
260 270 280 290 300
GLVGLLELRR HASLPIHAHR CGWGYLSRSP ALGWDFAPWH QIWRLAGADH
310 320 330 340 350
LHVNGLANKF SESDASVIAA ARAVLRPLFA HQPMPAMPVF SSGQTGLQAP
360 370 380 390 400
GTYAALGSAD LIHAAGGGIF GHPGGIASGV SAFRQAWEAA MAGTPLHEHA
410
KTHAELRSAL EFW
Length:413
Mass (Da):44,240
Last modified:August 22, 2006 - v1
Checksum:i6129481E62DAE443
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000316 Genomic DNA. Translation: ABE42060.1.
RefSeqiWP_011481070.1. NC_007948.1.
YP_546958.1. NC_007948.1.

Genome annotation databases

EnsemblBacteriaiABE42060; ABE42060; Bpro_0093.
GeneIDi4012254.
KEGGipol:Bpro_0093.
PATRICi22953222. VBIPolSp102244_0100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000316 Genomic DNA. Translation: ABE42060.1.
RefSeqiWP_011481070.1. NC_007948.1.
YP_546958.1. NC_007948.1.

3D structure databases

ProteinModelPortaliQ12HD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi296591.Bpro_0093.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABE42060; ABE42060; Bpro_0093.
GeneIDi4012254.
KEGGipol:Bpro_0093.
PATRICi22953222. VBIPolSp102244_0100.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiFCQEAIE.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciPSP296591:GHI4-814-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JS666 / ATCC BAA-500Imported.

Entry informationi

Entry nameiQ12HD2_POLSJ
AccessioniPrimary (citable) accession number: Q12HD2
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: February 4, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.