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Q12EK3 (Q12EK3_POLSJ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Shikimate dehydrogenase 1 HAMAP MF_00222
EC=1.1.1.25 HAMAP MF_00222
Gene names
Name:aroE1 HAMAP MF_00222
Ordered Locus Names:Bpro_1087
OrganismPolaromonas sp. (strain JS666 / ATCC BAA-500) [Complete proteome] [HAMAP]
Taxonomic identifier296591 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Polaromonas

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding126 – 1305NADP By similarity HAMAP MF_00222

Sites

Active site651Proton acceptor By similarity HAMAP MF_00222

Sequences

Sequence LengthMass (Da)Tools
Q12EK3 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 886456C66A242D64

FASTA28630,218
        10         20         30         40         50         60 
MDKYFVLGNP IQHSKSPQIH ARFAELTGQT LEYDRLLTPL DGFAATLAQL VQSGARGCNV 

        70         80         90        100        110        120 
TVPFKFEAFQ AAGTQSDRAQ LAQAANTLKL DGNTIYADNT DGIGLVNDIQ NNAGVSLAGR 

       130        140        150        160        170        180 
DVLLIGAGGA GAGALAPLLA AGPRRLVLAN RTRAKADALV LRHTLHPSLQ EALQKTELSA 

       190        200        210        220        230        240 
QDLQGIDGSF DVVINASASS LSGGGVPVDS RVLKPGALAY DMMYGPAADG FMTWAREHGA 

       250        260        270        280 
TPRDGLGMLV EQAAEAFALW RGVRPPSQQV LQEMRTAMQT QQTQAR

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References

[1]"Complete sequence of chromosome of Polaromonas sp. JS666."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JS666 / ATCC BAA-500.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000316 Genomic DNA. Translation: ABE43039.1.
RefSeqYP_547937.1. NC_007948.1.

3D structure databases

ProteinModelPortalQ12EK3.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ12EK3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4012094.
GenomeReviewsGene locus Bpro_1087 in contig CP000316_GR.
KEGGpol:Bpro_1087.
NMPDRfig|296591.1.peg.3318.
PATRIC22955258. VBIPolSp102244_1113.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0169.
HOGENOMHBG553408.
OMAVVFGNPI.
PhylomeDBQ12EK3.
ProtClustDBPRK00258.

Enzyme and pathway databases

BioCycPSP296591:BPRO_1087-MONOMER.

Family and domain databases

HAMAPMF_00222. Shikimate_DH_AroE.
[Tree]
InterProIPR016040. NAD(P)-bd_dom.
IPR011342. Shikimate_DH.
IPR013708. Shikimate_DH-bd_N.
IPR022893. Shikimate_quinate_DH.
IPR006151. Shikm_DH/Glu-tRNA_Rdtase.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00014.
PfamPF01488. Shikimate_DH. 1 hit.
PF08501. Shikimate_dh_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00507. AroE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ12EK3_POLSJ
AccessionPrimary (citable) accession number: Q12EK3
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: December 14, 2011
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info