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Q12EF1 (Q12EF1_POLSJ) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bpro_1139 EMBL ABE43091.1
OrganismPolaromonas sp. (strain JS666 / ATCC BAA-500) [Complete proteome] [HAMAP] EMBL ABE43091.1
Taxonomic identifier296591 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaePolaromonas

Protein attributes

Sequence length692 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q12EF1 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 843FE068D48804EC

FASTA69273,789
        10         20         30         40         50         60 
MENPDQLSLP LLGRRTIGQH QRILVGLLAL AVVVLGTVTF LALNQADKVA QQVAATGQSL 

        70         80         90        100        110        120 
MQSQRLAKSV SQALVGSAQA FPDVRESSDV LAKTVRGLKS GEDSLRLAPV AEALQPDVEK 

       130        140        150        160        170        180 
VTPFMERAEK NAKTVMGQQN ILTQVGNALR TINRQSSDLL EIAETVSSLK LQQNAAPAEI 

       190        200        210        220        230        240 
SASGQLVMLT QRIGKSANEF LTMEGVSPEA VFLLGKDLNS FKEIAQGLQD GSPELRLSGS 

       250        260        270        280        290        300 
KDPQTRERLE ALMALYEQTR VQAGAILGNL QGLVSAREAQ SSIIADSEPL RRGLEELQGK 

       310        320        330        340        350        360 
LSSQTGLGAG ALTVLVIAAA FALLCAAGLA RLQVQDSQQR QAVAETQRQE AKSQEQDAKR 

       370        380        390        400        410        420 
VNDANQAAIL RLMNELQTVA EGDLTQEATV TEDITGAIAD SVNYTVEELR QLVGNVQNTA 

       430        440        450        460        470        480 
TRVAQTTAQV ESTSTELLAA STEQLREIRE TGQSVLDMAS RINEVSTQAQ ESSQVARQSL 

       490        500        510        520        530        540 
TAAESGLQAV QNAIGGMNSI RDQIQETSKR IKRLGESSQE IGEITELISD ITEQTNVLAL 

       550        560        570        580        590        600 
NAAIQAASAG EAGRGFSVVA EEVQRLAERS ADATRQISAL VKAIQTDTQD AVAAMERSTQ 

       610        620        630        640        650        660 
GVVEGAKLSD NAGTALTEID QVSRRLADLI EQISNSASRE AASANVVAGN IQHIFAVTEQ 

       670        680        690 
TGEGTRSTAQ QVRDLSRMAE ELRQSVSRFK IA 

« Hide

References

[1]"Complete sequence of chromosome of Polaromonas sp. JS666."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JS666 / ATCC BAA-500.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000316 Genomic DNA. Translation: ABE43091.1.
RefSeqYP_547989.1. NC_007948.1.

3D structure databases

ProteinModelPortalQ12EF1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING296591.Bpro_1139.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE43091; ABE43091; Bpro_1139.
GeneID4011877.
KEGGpol:Bpro_1139.
PATRIC22955368. VBIPolSp102244_1167.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000220189.
KOK02660.
OMANPETAFL.
OrthoDBEOG6VB6X8.
ProtClustDBCLSK896636.

Enzyme and pathway databases

BioCycPSP296591:GHI4-1860-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ12EF1_POLSJ
AccessionPrimary (citable) accession number: Q12EF1
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: February 19, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)