Q12CF4 (Q12CF4_POLSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
3-carboxy-cis,cis-muconate cycloisomerase EMBL ABE43788.1
EC=5.5.1.2 EMBL ABE43788.1

Gene names

Ordered Locus Names:

Bpro_1855

Organism

Polaromonas sp. (strain JS666 / ATCC BAA-500) [Complete proteome] [HAMAP]

Taxonomic identifier

296591 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Polaromonas

Protein attributes

Sequence length	419 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL ABE43788.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protocatechuate catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	3-carboxy-cis,cis-muconate cycloisomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q12CF4 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: BB1C9889D313D76E	FASTA	419	44,094
	10 20 30 40 50 60 MSSIFEGFLS TSEILEAFSE RNFLDAMLRF EGSLARAQAS VGLIPEAVAQ SISGTCKVEL 70 80 90 100 110 120 FDVAKIVRES GRAGSIAIPL VKSLKETVGL FNKDAAGFVH FGSTSQDVID TALALVTRNA 130 140 150 160 170 180 LNLIEADVHK AVAALLVLAG RHAADPVLAR TLMQPASVTS FGLKCAGWAA PLVRSLQRLQ 190 200 210 220 230 240 ATAGNALSVQ LGGAVGTLAQ MQKAGKNLGP QVIAHMASEL KLRAPSCAWH TQRDEWVALG 250 260 270 280 290 300 CELGLLVGSL GKIAKDIALM GQYEVGEVAE PTEPGRGGSS AMPHKRNPVA CMVALAAAQR 310 320 330 340 350 360 APQRVAALLA AMPQEHERAL GNWQAELAEW PGLLMSAHGS ARAMAQALPG LQVDTQRMRA 370 380 390 400 410 NLDALRAVLP AEAADEWFSP GLARHAAELT QAQVLAHTQA LAALKPPKSP DTNTMKVMP

References

[1]

"Complete sequence of chromosome of Polaromonas sp. JS666." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JS666 / ATCC BAA-500.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000316 Genomic DNA. Translation: ABE43788.1.
RefSeq	YP_548686.1. NC_007948.1.
3D structure databases
ProteinModelPortal	Q12CF4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q12CF4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4015488.
GenomeReviews	Gene locus Bpro_1855 in contig CP000316_GR.
KEGG	pol:Bpro_1855.
NMPDR	fig|296591.1.peg.2749.
PATRIC	22956813. VBIPolSp102244_1879.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0015.
HOGENOM	HBG499008.
OMA	SLVHEQE.
ProtClustDB	CLSK723382.
Enzyme and pathway databases
BioCyc	PSP296591:BPRO_1855-MONOMER.
Family and domain databases
InterPro	IPR000362. Fumarate_lyase. IPR020557. Fumarate_lyase_CS. IPR008948. L-Aspartase-like. IPR024083. L-Aspartase-like_N. IPR022761. Lyase1_N. IPR012789. Protocat_PcaB. [Graphical view]
Gene3D	G3DSA:1.10.275.10. G3DSA:1.10.275.10. 1 hit.
KO	K01857.
Pfam	PF00206. Lyase_1. 1 hit. [Graphical view]
PRINTS	PR00149. FUMRATELYASE.
SUPFAM	SSF48557. L-Aspartase-like. 1 hit.
TIGRFAMs	TIGR02426. Protocat_pcaB. 1 hit.
PROSITE	PS00163. FUMARATE_LYASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q12CF4_POLSJ

Accession

Primary (citable) accession number: Q12CF4

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)