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Q12AQ9 (Q12AQ9_POLSJ) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bpro_2464 EMBL ABE44383.1
OrganismPolaromonas sp. (strain JS666 / ATCC BAA-500) [Complete proteome] [HAMAP] EMBL ABE44383.1
Taxonomic identifier296591 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaePolaromonas

Protein attributes

Sequence length576 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABE44383.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL ABE44383.1
Chain27 – 576550 Potential EMBL ABE44383.1
PRO_5000116883

Sequences

Sequence LengthMass (Da)Tools
Q12AQ9 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 88D2AA95007670BA

FASTA57661,233
        10         20         30         40         50         60 
MKWNVGTKMG AGFGLAMVFF VIVGAVSYRS TTQLIEASDL RQHTYEVLSR LAEMELLSAD 

        70         80         90        100        110        120 
MQNGLRGYVI TGEEKYLEPY QTAVGKIDKI LQEARKLTED NLREQRRLDA LEPLVKSRID 

       130        140        150        160        170        180 
LARETIDAIR TKGEAAGVEL IKTGKGRTLT SEIRKVIDEM EREEKDLLKQ RAEAAQNDAD 

       190        200        210        220        230        240 
NAKQIIVLGT LAALVFAALA GFVITRNIAR PLQDLTAVAE RITLGDLSVN VPVDDTRSDE 

       250        260        270        280        290        300 
VGALARTFDR MVQSLRAMAS AAEQIAAGDL RSTIKPQSPD DVLGTAFARM SESLREQIRG 

       310        320        330        340        350        360 
LAEGANVLGS AASEIVASTT QLAASASQSA AAVSETTTTV EEVRQTAQVA SQKAKQVSDS 

       370        380        390        400        410        420 
AQKAAQSSQS GRKSTEDVAA GMNRIRLQME AIAASMARLS EQSQAIGRIM ATVEDLAAQS 

       430        440        450        460        470        480 
NLLAVNAAIE AARAGEHGKG FGVVAQEVKS LAEQSRQATN QVRTILGDIQ KATIAAVLAT 

       490        500        510        520        530        540 
EQGNKAVEAG SRQSEVAGAS IQALAGSVTE AAQAATQIAA SSQQQLVGVD QVAGAMESIR 

       550        560        570 
QASTQNVAGA RQLEVAARNL DELGQRLKQM VALYTV 

« Hide

References

[1]"Complete sequence of chromosome of Polaromonas sp. JS666."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Richardson P.
Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JS666 / ATCC BAA-500.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000316 Genomic DNA. Translation: ABE44383.1.
RefSeqYP_549281.1. NC_007948.1.

3D structure databases

ProteinModelPortalQ12AQ9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING296591.Bpro_2464.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABE44383; ABE44383; Bpro_2464.
GeneID4014886.
KEGGpol:Bpro_2464.
PATRIC22958062. VBIPolSp102244_2493.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000025801.
OMAINNIGTH.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK754498.

Enzyme and pathway databases

BioCycPSP296591:GHI4-3185-MONOMER.

Family and domain databases

InterProIPR007891. CHASE3.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF05227. CHASE3. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ12AQ9_POLSJ
AccessionPrimary (citable) accession number: Q12AQ9
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: February 19, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)