Q128C9 (Q128C9_POLSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ABE45113.1
EC=3.5.1.28 EMBL ABE45113.1

Gene names

Ordered Locus Names:

Bpro_3199

Organism

Polaromonas sp. (strain JS666 / ATCC BAA-500) [Complete proteome] [HAMAP]

Taxonomic identifier

296591 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Comamonadaceae › Polaromonas

Protein attributes

Sequence length	471 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABE45113.1
Molecular function	Hydrolase EMBL ABE45113.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 33	33	Potential EMBL ABE45113.1
	Chain	34 – 471	438	Potential EMBL ABE45113.1		PRO_5000117028

Sequences

	Sequence		Length	Mass (Da)
	Q128C9 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 85BBD305FD6D7B89	FASTA	471	50,375
	10 20 30 40 50 60 MTNKSGRHFN RRSALQLGGV VLLLGAQHIA RGATIVAVRV WPAKDYTRVT IESDGEIKAR 70 80 90 100 110 120 QFFVAEPPRL AVDIEGIDLI PALRELVAKV KSDDPNISGI RVGQNAPGVV RLVIDLKQAM 130 140 150 160 170 180 LPQVFTLPPV AAYQHRLVLD LYPAQAIDPL EALIAERLAD KQAGAGSSTS AAPDPLGELI 190 200 210 220 230 240 ARQTGRAPSG AMAGGDKPAG NPPLAGSADD RLPLPAARPP GDMAAAGKGR TEGKTDRLVI 250 260 270 280 290 300 VALDPGHGGE DPGAVGPGGT REKDVVLQIA HRLRDRINQQ PNMRAYLTRD ADFFVPLHIR 310 320 330 340 350 360 VQKARRVQAD LFISIHADAF FTARPQGASV FALSDKGASS SAARWLAEKE NSADLVGGVN 370 380 390 400 410 420 VKARDVQVQK ALLDMSTTAQ INDSLKLGSA MLGEIGHVGR LHKPRVEQAG FAVLKAPDIP 430 440 450 460 470 SVLVETAFIS NPEEEARLRS DDYQIQLADA LMRGISRYFA RNPPLARNRA L

References

[1]

"Complete sequence of chromosome of Polaromonas sp. JS666." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Munk A.C., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Richardson P. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JS666 / ATCC BAA-500.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000316 Genomic DNA. Translation: ABE45113.1.
RefSeq	YP_550011.1. NC_007948.1.
3D structure databases
ProteinModelPortal	Q128C9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q128C9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4014123.
GenomeReviews	Gene locus Bpro_3199 in contig CP000316_GR.
KEGG	pol:Bpro_3199.
NMPDR	fig|296591.1.peg.4763.
PATRIC	22959610. VBIPolSp102244_3260.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0860.
HOGENOM	HBG656726.
OMA	VWPAEDY.
PhylomeDB	Q128C9.
ProtClustDB	CLSK723578.
Enzyme and pathway databases
BioCyc	PSP296591:BPRO_3199-MONOMER.
Family and domain databases
InterPro	IPR021731. AMIN. IPR002508. CW_Hdrlase/autolysin_cat. [Graphical view]
Gene3D	G3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KO	K01448.
Pfam	PF01520. Amidase_3. 1 hit. PF11741. AMIN. 1 hit. [Graphical view]
SMART	SM00646. Ami_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q128C9_POLSJ

Accession

Primary (citable) accession number: Q128C9

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)