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Protein

Transcriptional activator HAA1

Gene

HAA1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Regulates the transcription of a set of genes, many of which encode membrane proteins. Among the genes regulated are YGR138C and YRO2. Does not seem to be dependent on copper.1 Publication

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi11 – 111ZincPROSITE-ProRule annotation
Metal bindingi14 – 141ZincPROSITE-ProRule annotation
Metal bindingi23 – 231ZincPROSITE-ProRule annotation
Metal bindingi25 – 251ZincPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi1 – 4040Copper-fistPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

  • positive regulation of transcription from RNA polymerase II promoter Source: SGD
  • positive regulation of transcription from RNA polymerase II promoter in response to acidic pH Source: SGD
  • positive regulation of transcription from RNA polymerase II promoter in response to stress Source: SGD
  • transcription from RNA polymerase II promoter Source: GOC
Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

Copper, DNA-binding, Metal-binding, Zinc

Enzyme and pathway databases

BioCyciYEAST:G3O-34170-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transcriptional activator HAA1
Gene namesi
Name:HAA1
Ordered Locus Names:YPR008W
ORF Names:LPZ8W, YP9531.01, YP9723.08
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome XVI

Organism-specific databases

CYGDiYPR008w.
EuPathDBiFungiDB:YPR008W.
SGDiS000006212. HAA1.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 694694Transcriptional activator HAA1PRO_0000194933Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei125 – 1251Phosphoserine1 Publication
Modified residuei231 – 2311Phosphoserine1 Publication
Modified residuei241 – 2411Phosphoserine2 Publications
Modified residuei291 – 2911Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ12753.
PaxDbiQ12753.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
FUS1P117103EBI-8118,EBI-7179

Protein-protein interaction databases

BioGridi36186. 39 interactions.
DIPiDIP-1462N.
IntActiQ12753. 7 interactions.
MINTiMINT-402478.
STRINGi4932.YPR008W.

Structurei

3D structure databases

ProteinModelPortaliQ12753.
SMRiQ12753. Positions 1-42.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 copper-fist DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG71500.
GeneTreeiENSGT00530000068810.
InParanoidiQ12753.
OMAiCTCGRLE.
OrthoDBiEOG7J9W29.

Family and domain databases

Gene3Di3.90.430.10. 1 hit.
InterProiIPR001083. Cu_fist_DNA-bd.
[Graphical view]
PfamiPF00649. Copper-fist. 1 hit.
[Graphical view]
PRINTSiPR00617. COPPERFIST.
SMARTiSM00412. Cu_FIST. 1 hit.
[Graphical view]
SUPFAMiSSF57879. SSF57879. 1 hit.
PROSITEiPS01119. COPPER_FIST_1. 1 hit.
PS50073. COPPER_FIST_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12753-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLINGIKYA CERCIRGHRV TTCNHTDQPL MMIKPKGRPS TTCDYCKQLR
60 70 80 90 100
KNKNANPEGV CTCGRLEKKK LAQKAKEEAR AKAKEKQRKQ CTCGTDEVCK
110 120 130 140 150
YHAQKRHLRK SPSSSQKKGR SISRSQPMFE RVLSSTSLDS NMLSGHGALS
160 170 180 190 200
DTSSILTSTF LDSEPGVGKI SKDYHHVPSL ASISSLQSSQ SLDQNFSIPQ
210 220 230 240 250
SPPLSSMSFN FLTGNINETN QNHSNHQHSK SGNNWQDSSV SLPAKADSRL
260 270 280 290 300
NMMDKNNSVG LDLLGHSKRI SPISNSRVGE VSVPLEEYIP SDIDGVGRVT
310 320 330 340 350
DKSSLVYDWP FDESIERNFS TTATAATGES KFDINDNCNR INSKSYSKTN
360 370 380 390 400
SMNGNGMNNS NNNNINSNGN DKNNNNSSRQ EHQGNGLFDM FTDSSSISTL
410 420 430 440 450
SRANLLLQEK IGSQENSVKQ ENYSKNPQLR HQLTSRSRSF IHHPANEYLK
460 470 480 490 500
NTFGNSHSND IGKGVEVLSL TPSFMDIPEK ERETERSPSS NYITDRPFTR
510 520 530 540 550
KPRSSSIDVN HRYPPMAPTT VATSPGALNN AVASNLDDQL SLTSLNSQPS
560 570 580 590 600
SIANMMMDPS NLAEQSSIHS VPQSINSPRM PKTGSRQDKN IHTKKEERNP
610 620 630 640 650
LNNIHDLSQL ENVPDEMNQM FSPPLKSMNR PDAIRENSSS SNFIIQGNSM
660 670 680 690
ISTPSGRNDL PDTSPMSSIQ TASPPSQLLT DQGFADLDNF MSSL
Length:694
Mass (Da):76,671
Last modified:November 1, 1996 - v1
Checksum:i0A129F79B4E99CA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U31900 Genomic DNA. Translation: AAA97587.1.
Z71255 Genomic DNA. Translation: CAA95048.1.
Z48951 Genomic DNA. Translation: CAA88786.1.
Z49919 Genomic DNA. Translation: CAA90152.1.
AY692804 Genomic DNA. Translation: AAT92823.1.
BK006949 Genomic DNA. Translation: DAA11435.1.
PIRiS59753.
RefSeqiNP_015333.1. NM_001184105.1.

Genome annotation databases

EnsemblFungiiYPR008W; YPR008W; YPR008W.
GeneIDi856117.
KEGGisce:YPR008W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U31900 Genomic DNA. Translation: AAA97587.1.
Z71255 Genomic DNA. Translation: CAA95048.1.
Z48951 Genomic DNA. Translation: CAA88786.1.
Z49919 Genomic DNA. Translation: CAA90152.1.
AY692804 Genomic DNA. Translation: AAT92823.1.
BK006949 Genomic DNA. Translation: DAA11435.1.
PIRiS59753.
RefSeqiNP_015333.1. NM_001184105.1.

3D structure databases

ProteinModelPortaliQ12753.
SMRiQ12753. Positions 1-42.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi36186. 39 interactions.
DIPiDIP-1462N.
IntActiQ12753. 7 interactions.
MINTiMINT-402478.
STRINGi4932.YPR008W.

Proteomic databases

MaxQBiQ12753.
PaxDbiQ12753.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYPR008W; YPR008W; YPR008W.
GeneIDi856117.
KEGGisce:YPR008W.

Organism-specific databases

CYGDiYPR008w.
EuPathDBiFungiDB:YPR008W.
SGDiS000006212. HAA1.

Phylogenomic databases

eggNOGiNOG71500.
GeneTreeiENSGT00530000068810.
InParanoidiQ12753.
OMAiCTCGRLE.
OrthoDBiEOG7J9W29.

Enzyme and pathway databases

BioCyciYEAST:G3O-34170-MONOMER.

Miscellaneous databases

NextBioi981192.
PROiQ12753.

Family and domain databases

Gene3Di3.90.430.10. 1 hit.
InterProiIPR001083. Cu_fist_DNA-bd.
[Graphical view]
PfamiPF00649. Copper-fist. 1 hit.
[Graphical view]
PRINTSiPR00617. COPPERFIST.
SMARTiSM00412. Cu_FIST. 1 hit.
[Graphical view]
SUPFAMiSSF57879. SSF57879. 1 hit.
PROSITEiPS01119. COPPER_FIST_1. 1 hit.
PS50073. COPPER_FIST_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
    Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
    , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
    Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. "Haa1, a protein homologous to the copper-regulated transcription factor ace1, is a novel transcriptional activator."
    Keller G., Ray E., Brown P.O., Winge D.R.
    J. Biol. Chem. 276:38697-38702(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, SUBCELLULAR LOCATION.
  5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  6. "Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway."
    Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J., Mann M., Jensen O.N.
    Mol. Cell. Proteomics 4:310-327(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-241, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Strain: YAL6B.
  7. "Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae."
    Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P.
    J. Proteome Res. 6:1190-1197(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Strain: ADR376.
  8. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
    Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
    Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-125 AND SER-241, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  9. "Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution."
    Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.
    Science 325:1682-1686(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-231 AND SER-291, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  10. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiHAA1_YEAST
AccessioniPrimary (citable) accession number: Q12753
Secondary accession number(s): D6W419
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 16, 2001
Last sequence update: November 1, 1996
Last modified: June 24, 2015
This is version 122 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 339 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.