Q12691 (ATN5_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 114.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Sodium transport ATPase 5 EC=3.6.3.7 | ||||||
| Gene names |
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| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||||||
| Taxonomic identifier | 559292 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 1091 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of sodium or lithium ions to allow salt tolerance By similarity. |
| Catalytic activity | ATP + H2O + Na+(In) = ADP + phosphate + Na+(Out). |
| Subcellular location | |
| Miscellaneous | Present with 606 molecules/cell in log phase SD medium. Ref.4 |
| Sequence similarities | Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IID subfamily. [View classification] |
Ontologies
| Keywords | |
|---|---|
| Biological process | Ion transport Sodium transport Transport |
| Cellular component | Cell membrane Membrane |
| Domain | Transmembrane Transmembrane helix |
| Ligand | ATP-binding Magnesium Nucleotide-binding Sodium |
| Molecular function | Hydrolase |
| PTM | Isopeptide bond Phosphoprotein Ubl conjugation |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | ATP biosynthetic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membraneInferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane enriched fractionInferred from direct assay. Source: SGD |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW metal ion bindingInferred from electronic annotation. Source: InterPro sodium-exporting ATPase activity, phosphorylative mechanismInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1091 | 1091 | Sodium transport ATPase 5 | PRO_0000046244 | |||||
Regions | |||||||||
| Topological domain | 1 – 63 | 63 | Cytoplasmic Potential | ||||||
| Transmembrane | 64 – 84 | 21 | Helical; Potential | ||||||
| Topological domain | 85 – 90 | 6 | Extracellular Potential | ||||||
| Transmembrane | 91 – 111 | 21 | Helical; Potential | ||||||
| Topological domain | 112 – 282 | 171 | Cytoplasmic Potential | ||||||
| Transmembrane | 283 – 303 | 21 | Helical; Potential | ||||||
| Topological domain | 304 – 312 | 9 | Extracellular Potential | ||||||
| Transmembrane | 313 – 333 | 21 | Helical; Potential | ||||||
| Topological domain | 334 – 815 | 482 | Cytoplasmic Potential | ||||||
| Transmembrane | 816 – 836 | 21 | Helical; Potential | ||||||
| Topological domain | 837 – 848 | 12 | Extracellular Potential | ||||||
| Transmembrane | 849 – 869 | 21 | Helical; Potential | ||||||
| Topological domain | 870 – 885 | 16 | Cytoplasmic Potential | ||||||
| Transmembrane | 886 – 906 | 21 | Helical; Potential | ||||||
| Topological domain | 907 – 943 | 37 | Extracellular Potential | ||||||
| Transmembrane | 944 – 964 | 21 | Helical; Potential | ||||||
| Topological domain | 965 – 991 | 27 | Cytoplasmic Potential | ||||||
| Transmembrane | 992 – 1012 | 21 | Helical; Potential | ||||||
| Topological domain | 1013 – 1021 | 9 | Extracellular Potential | ||||||
| Transmembrane | 1022 – 1042 | 21 | Helical; Potential | ||||||
| Topological domain | 1043 – 1091 | 49 | Cytoplasmic Potential | ||||||
Sites | |||||||||
| Active site | 369 | 1 | 4-aspartylphosphate intermediate By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 177 | 1 | Phosphoserine Ref.7 | ||||||
| Cross-link | 196 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) Ref.5 | |||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome IV." Jacq C., Alt-Moerbe J., Andre B., Arnold W., Bahr A., Ballesta J.P.G., Bargues M., Baron L., Becker A., Biteau N., Bloecker H., Blugeon C., Boskovic J., Brandt P., Brueckner M., Buitrago M.J., Coster F., Delaveau T. Zaccaria P.Nature 387:75-78(1997) [PubMed: 9169867] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204508 / S288c. |
| [2] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [3] | "Global analysis of protein localization in budding yeast." Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K. Nature 425:686-691(2003) [PubMed: 14562095] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]. |
| [4] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| [5] | "A subset of membrane-associated proteins is ubiquitinated in response to mutations in the endoplasmic reticulum degradation machinery." Hitchcock A.L., Auld K., Gygi S.P., Silver P.A. Proc. Natl. Acad. Sci. U.S.A. 100:12735-12740(2003) [PubMed: 14557538] [Abstract] Cited for: UBIQUITINATION [LARGE SCALE ANALYSIS] AT LYS-196, MASS SPECTROMETRY. |
| [6] | "A global topology map of the Saccharomyces cerevisiae membrane proteome." Kim H., Melen K., Oesterberg M., von Heijne G. Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed: 16847258] [Abstract] Cited for: TOPOLOGY [LARGE SCALE ANALYSIS]. Strain: ATCC 208353 / W303-1A. |
| [7] | "A multidimensional chromatography technology for in-depth phosphoproteome analysis." Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H. Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed: 18407956] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-177, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z68196 Genomic DNA. Translation: CAA92377.1. Z74334 Genomic DNA. Translation: CAA98864.1. Z74335 Genomic DNA. Translation: CAA98865.1. BK006938 Genomic DNA. Translation: DAA11886.1. |
| PIR | S67852. |
| RefSeq | NP_010323.1. NM_001180346.1. |
3D structure databases | |
| ProteinModelPortal | Q12691. |
| SMR | Q12691. Positions 117-244, 478-649, 737-803. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-5253N. |
| IntAct | Q12691. 1 interaction. |
| MINT | MINT-547436. |
| STRING | Q12691. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblFungi | YDR038C; YDR038C; YDR038C. |
| GeneID | 851608. |
| KEGG | sce:YDR038C. |
Organism-specific databases | |
| CYGD | YDR038c. |
| SGD | S000002445. ENA5. |
Phylogenomic databases | |
| eggNOG | fuNOG05186. |
| HOGENOM | HBG456486. |
| OrthoDB | EOG46X2HG. |
Gene expression databases | |
| ArrayExpress | Q12691. |
| Genevestigator | Q12691. |
| GermOnline | YDR038C. Saccharomyces cerevisiae. |
Family and domain databases | |
| InterPro | IPR023306. ATPase_cation_domN. IPR008250. ATPase_P-typ_ATPase-assoc-dom. IPR006068. ATPase_P-typ_cation-transptr_C. IPR004014. ATPase_P-typ_cation-transptr_N. IPR023300. ATPase_P-typ_cyto_domA. IPR023299. ATPase_P-typ_cyto_domN. IPR001757. ATPase_P-typ_ion-transptr. IPR006414. ATPase_P-typ_K/Na-efflux_fun. IPR018303. ATPase_P-typ_P_site. IPR023298. ATPase_P-typ_TM_dom. IPR005834. Dehalogen-like_hydro. IPR023214. HAD-like_dom. [Graphical view] |
| Gene3D | G3DSA:2.70.150.10. ATPase_P-typ_cyto_domA. 1 hit. G3DSA:3.40.1110.10. ATPase_P-typ_cyto_domN. 2 hits. G3DSA:1.20.1110.10. ATPase_P-typ_TM_dom. 1 hit. |
| PANTHER | PTHR24093:SF83. PTHR24093:SF83. 1 hit. |
| Pfam | PF00689. Cation_ATPase_C. 1 hit. PF00690. Cation_ATPase_N. 1 hit. PF00122. E1-E2_ATPase. 1 hit. PF00702. Hydrolase. 1 hit. [Graphical view] |
| PRINTS | PR00119. CATATPASE. |
| SMART | SM00831. Cation_ATPase_N. 1 hit. [Graphical view] |
| SUPFAM | SSF81660. ATPase_cation_domN. 1 hit. SSF56784. HAD-like_dom. 1 hit. |
| TIGRFAMs | TIGR01523. ATPase-IID_K-Na. 1 hit. TIGR01494. ATPase_P-type. 3 hits. |
| PROSITE | PS00154. ATPASE_E1_E2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| NextBio | 969118. |
Entry information
| Entry name | ATN5_YEAST | ||||||||
| Accession | Primary (citable) accession number: Q12691 Secondary accession number(s): D6VS26, E9PAF4, P89901 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| SIMILARITY comments Index of protein domains and families |

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