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Protein

Glucanase

Gene

celA

Organism
Neocallimastix patriciarum (Rumen fungus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei182UniRule annotation1
Active sitei224Proton donorUniRule annotation1
Active sitei385NucleophileUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cellulose degradationUniRule annotation, Polysaccharide degradation

Protein family/group databases

CAZyiCBM1. Carbohydrate-Binding Module Family 1.
GH6. Glycoside Hydrolase Family 6.
mycoCLAPiCBH6A_NEOPA.

Names & Taxonomyi

Protein namesi
Recommended name:
GlucanaseUniRule annotation (EC:3.2.1.-UniRule annotation)
Gene namesi
Name:celAImported
OrganismiNeocallimastix patriciarum (Rumen fungus)Imported
Taxonomic identifieri4758 [NCBI]
Taxonomic lineageiEukaryotaFungiNeocallimastigomycotaNeocallimastigomycetesNeocallimastigalesNeocallimastigaceaeNeocallimastix

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 20UniRule annotationAdd BLAST20
ChainiPRO_500514260121 – 428GlucanaseUniRule annotationAdd BLAST408

Structurei

3D structure databases

ProteinModelPortaliQ12646.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 57CBM1 (fungal-type carbohydrate-binding)InterPro annotationAdd BLAST37

Sequence similaritiesi

Belongs to the glycosyl hydrolase family 6.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Family and domain databases

Gene3Di3.20.20.40. 1 hit.
InterProiIPR016288. Beta_cellobiohydrolase.
IPR000254. Cellulose-bd_dom_fun.
[Graphical view]
PfamiPF00734. CBM_1. 1 hit.
PF01341. Glyco_hydro_6. 1 hit.
[Graphical view]
PIRSFiPIRSF001100. Beta_cellobiohydrolase. 1 hit.
PRINTSiPR00733. GLHYDRLASE6.
SMARTiSM00236. fCBD. 1 hit.
[Graphical view]
SUPFAMiSSF51989. SSF51989. 1 hit.
SSF57180. SSF57180. 1 hit.
PROSITEiPS00562. CBM1_1. 1 hit.
PS51164. CBM1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12646-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNLLLASVL SLGLAGLANA ACGGAWAQCG GENFHGDKCC VSGHTCVSIN
60 70 80 90 100
QWYSQCQPGG APSNNASNNN NNNNNNNNNN NNNNNNHNNN NNNNNNNNNG
110 120 130 140 150
GSGSTKNFFD NQIYANPKFI EEVNSSIPRL SYDLQQKAQK VKNVPTAVWL
160 170 180 190 200
AWDGATGEVA QHLKAAGSKT VVFIMYMIPT RDCNANASAG GAGNLNTYKG
210 220 230 240 250
YVDNIARTIR SYPNSKVVMI LEPDTLGNLV TANSANCQNV RNLHKNALSY
260 270 280 290 300
GVNVFGSMSN VSVYLDAAHG AWLGSSTDKV ASVVKEILNN APNGKIRGLS
310 320 330 340 350
TNISNYQSIS SEYQYHQKLA SALAAVGVPN MHFIVDTGRN GVTINSGTWC
360 370 380 390 400
NLVGTGLGER PRGNPNAGMP LLDAYMWLKT PGESDGSSSG SRADPNCSSN
410 420
DSLRGAPDAG QWFHDYFAQL VRNARPSF
Length:428
Mass (Da):45,675
Last modified:November 1, 1996 - v1
Checksum:i9B23EB5EA07F91C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29872 mRNA. Translation: AAC49315.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U29872 mRNA. Translation: AAC49315.1.

3D structure databases

ProteinModelPortaliQ12646.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM1. Carbohydrate-Binding Module Family 1.
GH6. Glycoside Hydrolase Family 6.
mycoCLAPiCBH6A_NEOPA.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.20.20.40. 1 hit.
InterProiIPR016288. Beta_cellobiohydrolase.
IPR000254. Cellulose-bd_dom_fun.
[Graphical view]
PfamiPF00734. CBM_1. 1 hit.
PF01341. Glyco_hydro_6. 1 hit.
[Graphical view]
PIRSFiPIRSF001100. Beta_cellobiohydrolase. 1 hit.
PRINTSiPR00733. GLHYDRLASE6.
SMARTiSM00236. fCBD. 1 hit.
[Graphical view]
SUPFAMiSSF51989. SSF51989. 1 hit.
SSF57180. SSF57180. 1 hit.
PROSITEiPS00562. CBM1_1. 1 hit.
PS51164. CBM1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ12646_NEOPA
AccessioniPrimary (citable) accession number: Q12646
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 9, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.