Q12639 (PELA_MYCPO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Pectin lyase
EC=4.2.2.10

Gene names

Name:

PELA

Organism

Mycosphaerella pinodes (Pea foot rot fungus) (Didymella pinodes)

Taxonomic identifier

749589 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Pezizomycotina › Dothideomycetes › Pleosporomycetidae › Pleosporales › Pleosporineae › Didymellaceae › Peyronellaea

Protein attributes

Sequence length	299 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Eliminative cleavage of (1->4)-alpha-D-galacturonan methyl ester to give oligosaccharides with 4-deoxy-6-O-methyl-alpha-D-galact-4-enuronosyl groups at their non-reducing ends.
Subcellular location	Secreted Potential.
Sequence similarities	Belongs to the polysaccharide lyase 1 family.

Ontologies

Keywords
Cellular component	Secreted
Domain	Signal
Molecular function	Lyase
Gene Ontology (GO)
Cellular component	extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	pectin lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 18	18	Potential
	Chain	19 – 299	281	Pectin lyase		PRO_0000024900

Sequences

	Sequence		Length	Mass (Da)
	Q12639 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 9CE6AE5B1C6F37B3	FASTA	299	33,073
	10 20 30 40 50 60 MKFSTFVSLG LTAITALAAP TPSMIDVKRD VVKRAASLED VATAERPLRC RPSASLPPPS 70 80 90 100 110 120 RVTRLPLFSS LVLSRALATT SRSAATSPSS DRTARSCLRT SPSPSRVSRM LSFVTLPSRR 130 140 150 160 170 180 SSVAMLSPSR RYELVTPKEI TTYLHRLQSE NVWVDHLDLS SDRDHDKDYY DGLLDITHAA 190 200 210 220 230 240 DFVTVTNTFL HDHWKASLIG HSDSNGAEDK GHLTVTYANN YLKNLNSRGR PSASAQATST 250 260 270 280 290 TTTTRTCRMV STPARVRSCL FRTTFLSAPR RLFTRLMLDM LLSLATTSVM ARTLPRRVL

References

[1]	Heim P. Submitted (MAY-1995) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: DSM 62763 / Berkeley Bloxom.

Cross-references

Sequence databases
EMBL GenBank DDBJ	X87580 Genomic DNA. Translation: CAA60884.1.
PIR	S55472.
3D structure databases
ProteinModelPortal	Q12639.
ModBase	Search...
Protein family/group databases
CAZy	PL1. Polysaccharide Lyase Family 1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR002022. Amb_allergen. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF00544. Pec_lyase_C. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

PELA_MYCPO

Accession

Primary (citable) accession number: Q12639

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 15, 1998
Last sequence update:	November 1, 1996
Last modified:	September 21, 2011
This is version 60 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program