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Protein

Zinc finger protein YPR015C

Gene

YPR015C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri185 – 20723C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri213 – 23725C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciYEAST:G3O-34175-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein YPR015C
Gene namesi
Ordered Locus Names:YPR015C
ORF Names:LPZ14c
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XVI

Organism-specific databases

EuPathDBiFungiDB:YPR015C.
SGDiS000006219. YPR015C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 247247Zinc finger protein YPR015CPRO_0000255975Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi36192. 45 interactions.
DIPiDIP-6487N.
IntActiQ12531. 2 interactions.
MINTiMINT-677777.

Structurei

3D structure databases

ProteinModelPortaliQ12531.
SMRiQ12531. Positions 151-237.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 C2H2-type zinc fingers.PROSITE-ProRule annotation

Zinc finger

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Zinc fingeri185 – 20723C2H2-type 1PROSITE-ProRule annotationAdd
BLAST
Zinc fingeri213 – 23725C2H2-type 2PROSITE-ProRule annotationAdd
BLAST

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

GeneTreeiENSGT00730000113475.
InParanoidiQ12531.
OMAiLRTHYLI.
OrthoDBiEOG78WM2P.

Family and domain databases

Gene3Di3.30.160.60. 2 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12531-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWRTKTLESM LCSPMKCSSS NIGGSYAQSS KEVSNTTKRE VHLPPCSSIM
60 70 80 90 100
HAPLTPEINQ AALPPPAYHY APSSLHQTED PVWRSSPNSI IFSPVIATPQ
110 120 130 140 150
PFPLTFVERQ SCCPIYSTAA SSYTAQSVPP SMQHFQEENH RAVSNEQYSL
160 170 180 190 200
PNVHIGQNPG TLLSQTQTDL DLIQKQLRAV VKLRKQCPIC GKVCSRPSTL
210 220 230 240
RTHYLIHTGD TPFKCTWEHC NKSFNVKSNM LRHLRTHQKK IAKKKHQ
Length:247
Mass (Da):27,775
Last modified:November 1, 1996 - v1
Checksum:i418504BA47B0C165
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti184 – 1841R → W in AAS56467 (PubMed:17322287).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U31900 Genomic DNA. Translation: AAA97593.1.
Z49919 Genomic DNA. Translation: CAA90159.1.
Z71255 Genomic DNA. Translation: CAA95011.1.
AY558141 Genomic DNA. Translation: AAS56467.1.
BK006949 Genomic DNA. Translation: DAA11441.1.
PIRiS57548.
RefSeqiNP_015340.1. NM_001184112.1.

Genome annotation databases

EnsemblFungiiYPR015C; YPR015C; YPR015C.
GeneIDi856125.
KEGGisce:YPR015C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U31900 Genomic DNA. Translation: AAA97593.1.
Z49919 Genomic DNA. Translation: CAA90159.1.
Z71255 Genomic DNA. Translation: CAA95011.1.
AY558141 Genomic DNA. Translation: AAS56467.1.
BK006949 Genomic DNA. Translation: DAA11441.1.
PIRiS57548.
RefSeqiNP_015340.1. NM_001184112.1.

3D structure databases

ProteinModelPortaliQ12531.
SMRiQ12531. Positions 151-237.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi36192. 45 interactions.
DIPiDIP-6487N.
IntActiQ12531. 2 interactions.
MINTiMINT-677777.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYPR015C; YPR015C; YPR015C.
GeneIDi856125.
KEGGisce:YPR015C.

Organism-specific databases

EuPathDBiFungiDB:YPR015C.
SGDiS000006219. YPR015C.

Phylogenomic databases

GeneTreeiENSGT00730000113475.
InParanoidiQ12531.
OMAiLRTHYLI.
OrthoDBiEOG78WM2P.

Enzyme and pathway databases

BioCyciYEAST:G3O-34175-MONOMER.

Miscellaneous databases

NextBioi981209.
PROiQ12531.

Family and domain databases

Gene3Di3.30.160.60. 2 hits.
InterProiIPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
SMARTiSM00355. ZnF_C2H2. 2 hits.
[Graphical view]
PROSITEiPS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
    Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
    , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
    Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  4. "Variations of the C2H2 zinc finger motif in the yeast genome and classification of yeast zinc finger proteins."
    Boehm S., Frishman D., Mewes H.-W.
    Nucleic Acids Res. 25:2464-2469(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: DOMAIN.

Entry informationi

Entry nameiYP015_YEAST
AccessioniPrimary (citable) accession number: Q12531
Secondary accession number(s): D6W425, Q6Q5F4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.