##gff-version 3 Q12414 UniProtKB Chain 1 1755 . . . ID=PRO_0000279169;Note=Transposon Ty1-PL Gag-Pol polyprotein Q12414 UniProtKB Chain 1 401 . . . ID=PRO_0000279170;Note=Capsid protein;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Chain 402 582 . . . ID=PRO_0000279171;Note=Ty1 protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Chain 583 1217 . . . ID=PRO_0000279172;Note=Integrase;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Chain 1218 1755 . . . ID=PRO_0000279173;Note=Reverse transcriptase/ribonuclease H;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Domain 660 835 . . . Note=Integrase catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Domain 1338 1476 . . . Note=Reverse transcriptase Ty1/copia-type Q12414 UniProtKB Domain 1610 1752 . . . Note=RNase H Ty1/copia-type Q12414 UniProtKB Region 1 93 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Region 126 174 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Region 299 401 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Region 352 421 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Region 583 640 . . . Note=Integrase-type zinc finger-like Q12414 UniProtKB Region 956 1087 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Region 1092 1111 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Region 1130 1187 . . . Note=Disordered;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Motif 1178 1212 . . . Note=Bipartite nuclear localization signal;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Compositional bias 1 36 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 47 67 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 71 85 . . . Note=Pro residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 131 164 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 360 374 . . . Note=Basic and acidic residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 375 421 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 969 983 . . . Note=Basic and acidic residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 993 1018 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 1040 1056 . . . Note=Basic and acidic residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 1057 1080 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 1097 1111 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 1134 1148 . . . Note=Pro residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Compositional bias 1153 1178 . . . Note=Polar residues;Ontology_term=ECO:0000256;evidence=ECO:0000256|SAM:MobiDB-lite Q12414 UniProtKB Active site 461 461 . . . Note=For protease activity%3B shared with dimeric partner;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU10094 Q12414 UniProtKB Binding site 671 671 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Binding site 736 736 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Binding site 1346 1346 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Binding site 1427 1427 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Binding site 1428 1428 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Binding site 1610 1610 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Binding site 1652 1652 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Binding site 1685 1685 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00457 Q12414 UniProtKB Site 401 402 . . . Note=Cleavage%3B by Ty1 protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Site 582 583 . . . Note=Cleavage%3B by Ty1 protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Site 1217 1218 . . . Note=Cleavage%3B by Ty1 protease;Ontology_term=ECO:0000250;evidence=ECO:0000250 Q12414 UniProtKB Modified residue 416 416 . . . Note=Phosphoserine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q99231