Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Ammonia transport outward protein 3

Gene

ATO3

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Transporter protein required for ammonia export. Induced in rho0 cells, probably to eliminate the excess ammonia that arises because of a potential defect in ammonia assimilation in those cells.1 Publication

GO - Molecular functioni

  • ammonium transmembrane transporter activity Source: SGD

GO - Biological processi

  • ammonium transmembrane transport Source: GOC
  • ammonium transport Source: SGD
  • nitrogen utilization Source: SGD
  • transmembrane transport Source: SGD
Complete GO annotation...

Keywords - Biological processi

Ammonia transport, Ion transport, Transport

Enzyme and pathway databases

BioCyciYEAST:G3O-29932-MONOMER.

Protein family/group databases

TCDBi2.A.96.1.5. 2.a.96. the acetate uptake transporter (acetr) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Ammonia transport outward protein 3
Gene namesi
Name:ATO3
Ordered Locus Names:YDR384C
ORF Names:D9481.20, D9509.4
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome IV

Organism-specific databases

EuPathDBiFungiDB:YDR384C.
SGDiS000002792. ATO3.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 8484ExtracellularSequence analysisAdd
BLAST
Transmembranei85 – 10521HelicalSequence analysisAdd
BLAST
Topological domaini106 – 12015CytoplasmicSequence analysisAdd
BLAST
Transmembranei121 – 14121HelicalSequence analysisAdd
BLAST
Topological domaini142 – 18140ExtracellularSequence analysisAdd
BLAST
Transmembranei182 – 20221HelicalSequence analysisAdd
BLAST
Topological domaini203 – 2075CytoplasmicSequence analysis
Transmembranei208 – 22821HelicalSequence analysisAdd
BLAST
Topological domaini229 – 2368ExtracellularSequence analysis
Transmembranei237 – 25721HelicalSequence analysisAdd
BLAST
Topological domaini258 – 27518CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: SGD
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 275275Ammonia transport outward protein 3PRO_0000135707Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei4 – 41PhosphoserineCombined sources

Keywords - PTMi

Phosphoprotein

Proteomic databases

PeptideAtlasiQ12359.
PRIDEiQ12359.
TopDownProteomicsiQ12359.

PTM databases

iPTMnetiQ12359.

Expressioni

Inductioni

Expression is under the control of the ADR1, CAT8, and GCN4 transcription factors. Also induced by external ammonia and in rho0 cells.3 Publications

Interactioni

Protein-protein interaction databases

BioGridi32445. 14 interactions.
DIPiDIP-4513N.
IntActiQ12359. 2 interactions.
MINTiMINT-565107.

Structurei

3D structure databases

ProteinModelPortaliQ12359.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

GeneTreeiENSGT00390000006887.
HOGENOMiHOG000224167.
InParanoidiQ12359.
KOiK07034.
OMAiCTLKSTW.
OrthoDBiEOG7BKD57.

Family and domain databases

InterProiIPR000791. Grp1/Fun34/SatP.
[Graphical view]
PfamiPF01184. Grp1_Fun34_YaaH. 1 hit.
[Graphical view]
PROSITEiPS01114. GPR1_FUN34_YAAH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12359-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSSASSPQD LEKGVNTLEN IETLPQQGSI AGVSQGFPNI QEIYSDRDFI
60 70 80 90 100
TLGSSTYRRR DLLNALDRGD GEEGNCAKYT PHQFANPVPL GLASFSLSCL
110 120 130 140 150
VLSLINANVR GVTDGKWALS LFMFFGGAIE LFAGLLCFVI GDTYAMTVFS
160 170 180 190 200
SFGGFWICYG YGLTDTDNLV SGYTDPTMLN NVIGFFLAGW TVFTFLMLMC
210 220 230 240 250
TLKSTWGLFL LLTFLDLTFL LLCIGTFIDN NNLKMAGGYF GILSSCCGWY
260 270
SLYCSVVSPS NSYLAFRAHT MPNAP
Length:275
Mass (Da):30,028
Last modified:November 1, 1996 - v1
Checksum:iCB4E91128403C6CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28373 Genomic DNA. Translation: AAB64820.1.
U32274 Genomic DNA. Translation: AAB64826.1.
BK006938 Genomic DNA. Translation: DAA12228.1.
PIRiS61179.
RefSeqiNP_010672.1. NM_001180692.1.

Genome annotation databases

EnsemblFungiiYDR384C; YDR384C; YDR384C.
GeneIDi851992.
KEGGisce:YDR384C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28373 Genomic DNA. Translation: AAB64820.1.
U32274 Genomic DNA. Translation: AAB64826.1.
BK006938 Genomic DNA. Translation: DAA12228.1.
PIRiS61179.
RefSeqiNP_010672.1. NM_001180692.1.

3D structure databases

ProteinModelPortaliQ12359.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi32445. 14 interactions.
DIPiDIP-4513N.
IntActiQ12359. 2 interactions.
MINTiMINT-565107.

Protein family/group databases

TCDBi2.A.96.1.5. 2.a.96. the acetate uptake transporter (acetr) family.

PTM databases

iPTMnetiQ12359.

Proteomic databases

PeptideAtlasiQ12359.
PRIDEiQ12359.
TopDownProteomicsiQ12359.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYDR384C; YDR384C; YDR384C.
GeneIDi851992.
KEGGisce:YDR384C.

Organism-specific databases

EuPathDBiFungiDB:YDR384C.
SGDiS000002792. ATO3.

Phylogenomic databases

GeneTreeiENSGT00390000006887.
HOGENOMiHOG000224167.
InParanoidiQ12359.
KOiK07034.
OMAiCTLKSTW.
OrthoDBiEOG7BKD57.

Enzyme and pathway databases

BioCyciYEAST:G3O-29932-MONOMER.

Miscellaneous databases

PROiQ12359.

Family and domain databases

InterProiIPR000791. Grp1/Fun34/SatP.
[Graphical view]
PfamiPF01184. Grp1_Fun34_YaaH. 1 hit.
[Graphical view]
PROSITEiPS01114. GPR1_FUN34_YAAH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome IV."
    Jacq C., Alt-Moerbe J., Andre B., Arnold W., Bahr A., Ballesta J.P.G., Bargues M., Baron L., Becker A., Biteau N., Bloecker H., Blugeon C., Boskovic J., Brandt P., Brueckner M., Buitrago M.J., Coster F., Delaveau T.
    , del Rey F., Dujon B., Eide L.G., Garcia-Cantalejo J.M., Goffeau A., Gomez-Peris A., Granotier C., Hanemann V., Hankeln T., Hoheisel J.D., Jaeger W., Jimenez A., Jonniaux J.-L., Kraemer C., Kuester H., Laamanen P., Legros Y., Louis E.J., Moeller-Rieker S., Monnet A., Moro M., Mueller-Auer S., Nussbaumer B., Paricio N., Paulin L., Perea J., Perez-Alonso M., Perez-Ortin J.E., Pohl T.M., Prydz H., Purnelle B., Rasmussen S.W., Remacha M.A., Revuelta J.L., Rieger M., Salom D., Saluz H.P., Saiz J.E., Saren A.-M., Schaefer M., Scharfe M., Schmidt E.R., Schneider C., Scholler P., Schwarz S., Soler-Mira A., Urrestarazu L.A., Verhasselt P., Vissers S., Voet M., Volckaert G., Wagner G., Wambutt R., Wedler E., Wedler H., Woelfl S., Harris D.E., Bowman S., Brown D., Churcher C.M., Connor R., Dedman K., Gentles S., Hamlin N., Hunt S., Jones L., McDonald S., Murphy L.D., Niblett D., Odell C., Oliver K., Rajandream M.A., Richards C., Shore L., Walsh S.V., Barrell B.G., Dietrich F.S., Mulligan J.T., Allen E., Araujo R., Aviles E., Berno A., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M., Hunicke-Smith S., Hyman R.W., Komp C., Lashkari D., Lew H., Lin D., Mosedale D., Nakahara K., Namath A., Oefner P., Oh C., Petel F.X., Roberts D., Schramm S., Schroeder M., Shogren T., Shroff N., Winant A., Yelton M.A., Botstein D., Davis R.W., Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Du Z., Favello A., Fulton L., Gattung S., Greco T., Hallsworth K., Hawkins J., Hillier L.W., Jier M., Johnson D., Johnston L., Kirsten J., Kucaba T., Langston Y., Latreille P., Le T., Mardis E., Menezes S., Miller N., Nhan M., Pauley A., Peluso D., Rifkin L., Riles L., Taich A., Trevaskis E., Vignati D., Wilcox L., Wohldman P., Vaudin M., Wilson R., Waterston R., Albermann K., Hani J., Heumann K., Kleine K., Mewes H.-W., Zollner A., Zaccaria P.
    Nature 387:75-78(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. "Ammonia pulses and metabolic oscillations guide yeast colony development."
    Palkova Z., Devaux F., Icicova M., Minarikova L., Le Crom S., Jacq C.
    Mol. Biol. Cell 13:3901-3914(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION.
  4. "ATO3 encoding a putative outward ammonium transporter is an RTG-independent retrograde responsive gene regulated by GCN4 and the Ssy1-Ptr3-Ssy5 amino acid sensor system."
    Guaragnella N., Butow R.A.
    J. Biol. Chem. 278:45882-45887(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION, SUBCELLULAR LOCATION.
  5. "Combined global localization analysis and transcriptome data identify genes that are directly coregulated by Adr1 and Cat8."
    Tachibana C., Yoo J.Y., Tagne J.-B., Kacherovsky N., Lee T.I., Young E.T.
    Mol. Cell. Biol. 25:2138-2146(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION.
  6. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
    Kim H., Melen K., Oesterberg M., von Heijne G.
    Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: ATCC 208353 / W303-1A.
  7. "Association of putative ammonium exporters Ato with detergent-resistant compartments of plasma membrane during yeast colony development: pH affects Ato1p localisation in patches."
    Ricicova M., Kucerova H., Vachova L., Palkova Z.
    Biochim. Biophys. Acta 1768:1170-1178(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: SUBCELLULAR LOCATION, INDUCTION.
  8. "Profiling phosphoproteins of yeast mitochondria reveals a role of phosphorylation in assembly of the ATP synthase."
    Reinders J., Wagner K., Zahedi R.P., Stojanovski D., Eyrich B., van der Laan M., Rehling P., Sickmann A., Pfanner N., Meisinger C.
    Mol. Cell. Proteomics 6:1896-1906(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-4, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Strain: ATCC 76625 / YPH499.
  9. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
    Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
    Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiATO3_YEAST
AccessioniPrimary (citable) accession number: Q12359
Secondary accession number(s): D6VT18
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 125 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome IV
    Yeast (Saccharomyces cerevisiae) chromosome IV: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.