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Q12239 (YO107_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 82. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized membrane protein YOL107W
Gene names
Ordered Locus Names:YOL107W
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length342 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Golgi apparatus membrane; Multi-pass membrane protein Ref.4.

Miscellaneous

Present with 1630 molecules/cell in log phase SD medium.

Ontologies

Keywords
   Cellular componentGolgi apparatus
Membrane
   DomainTransmembrane
Transmembrane helix
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentGolgi membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

integral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 342342Uncharacterized membrane protein YOL107W
PRO_0000235931

Regions

Topological domain1 – 2121Cytoplasmic Potential
Transmembrane22 – 4221Helical; Potential
Topological domain43 – 12179Lumenal Potential
Transmembrane122 – 14221Helical; Potential
Topological domain143 – 15917Cytoplasmic Potential
Transmembrane160 – 18021Helical; Potential
Topological domain181 – 20727Lumenal Potential
Transmembrane208 – 22821Helical; Potential
Topological domain229 – 342114Cytoplasmic Potential

Amino acid modifications

Glycosylation1141N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q12239 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 75C352C4CE35DC57

FASTA34239,742
        10         20         30         40         50         60 
MQYSSRFLEL NIPDSFLNIN KIPDATKFIT VTYICLTATL FCIRRSLYNK LVLEDPNLDY 

        70         80         90        100        110        120 
NLITSPLLQM VPSQIWRYPT SLVLSNFIDT KAWKVVVNLL NLIIGGSFIE RNWNSSKEMF 

       130        140        150        160        170        180 
KFIIVLGSLT NVLIIMLTLL VSFFSNKVRL DIPLDGNYTI LIGFPIIYRQ LLPETTIIHL 

       190        200        210        220        230        240 
KTPQFLAKNF RFKLLPIFVM FTMTVTQIIW FHHFAQLFSI WVTFFASWSY LRFFQKLAPL 

       250        260        270        280        290        300 
NCPSLPTTNS QGGQEILVGD ASDTFQLIYF FPDLIKPILR PIFNFIYNVV VVKFKVIKPF 

       310        320        330        340 
HDIDIDIGNT IAESRGAKKI MTVEERRRQL ALQVLEERMV NP 

« Hide

References

« Hide 'large scale' references
[1]"Sequence analysis of a 44 kb DNA fragment of yeast chromosome XV including the Ty1-H3 retrotransposon, the suf1(+) frameshift suppressor gene for tRNA-Gly, the yeast transfer RNA-Thr-1a and a delta element."
Vandenbol M., Durand P., Portetelle D., Hilger F.
Yeast 11:1069-1075(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 96604 / S288c / FY1679.
[2]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XV."
Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D. expand/collapse author list , de Haan M., Delius H., Durand P., Fairhead C., Feldmann H., Gaillon L., Galisson F., Gamo F.-J., Gancedo C., Goffeau A., Goulding S.E., Grivell L.A., Habbig B., Hand N.J., Hani J., Hattenhorst U., Hebling U., Hernando Y., Herrero E., Heumann K., Hiesel R., Hilger F., Hofmann B., Hollenberg C.P., Hughes B., Jauniaux J.-C., Kalogeropoulos A., Katsoulou C., Kordes E., Lafuente M.J., Landt O., Louis E.J., Maarse A.C., Madania A., Mannhaupt G., Marck C., Martin R.P., Mewes H.-W., Michaux G., Paces V., Parle-McDermott A.G., Pearson B.M., Perrin A., Pettersson B., Poch O., Pohl T.M., Poirey R., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rechmann S., Schwager C., Schweizer M., Sor F., Sterky F., Tarassov I.A., Teodoru C., Tettelin H., Thierry A., Tobiasch E., Tzermia M., Uhlen M., Unseld M., Valens M., Vandenbol M., Vetter I., Vlcek C., Voet M., Volckaert G., Voss H., Wambutt R., Wedler H., Wiemann S., Winsor B., Wolfe K.H., Zollner A., Zumstein E., Kleine K.
Nature 387:98-102(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[3]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[4]"Global analysis of protein localization in budding yeast."
Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K.
Nature 425:686-691(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[5]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[6]"A global topology map of the Saccharomyces cerevisiae membrane proteome."
Kim H., Melen K., Oesterberg M., von Heijne G.
Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
Strain: ATCC 208353 / W303-1A.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z48149 Genomic DNA. Translation: CAA88154.1.
Z74849 Genomic DNA. Translation: CAA99126.1.
BK006948 Genomic DNA. Translation: DAA10676.1.
PIRS51891.
RefSeqNP_014534.1. NM_001183361.1.

3D structure databases

ProteinModelPortalQ12239.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid34294. 15 interactions.
DIPDIP-4218N.
IntActQ12239. 2 interactions.
MINTMINT-554964.
STRING4932.YOL107W.

Proteomic databases

PaxDbQ12239.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYOL107W; YOL107W; YOL107W.
GeneID854043.
KEGGsce:YOL107W.

Organism-specific databases

CYGDYOL107w.
SGDS000005467. YOL107W.

Phylogenomic databases

eggNOGNOG251000.
GeneTreeENSGT00390000002470.
HOGENOMHOG000065992.
OMAPEHNIVL.
OrthoDBEOG72RN8C.

Enzyme and pathway databases

BioCycYEAST:G3O-33504-MONOMER.

Gene expression databases

GenevestigatorQ12239.

Family and domain databases

InterProIPR013861. DUF1751_Mem_euk.
[Graphical view]
PfamPF08551. DUF1751. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio975615.
PROQ12239.

Entry information

Entry nameYO107_YEAST
AccessionPrimary (citable) accession number: Q12239
Secondary accession number(s): D6W1W0
Entry history
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: November 1, 1996
Last modified: February 19, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XV

Yeast (Saccharomyces cerevisiae) chromosome XV: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD