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Q12239

- YO107_YEAST

UniProt

Q12239 - YO107_YEAST

Protein

Uncharacterized membrane protein YOL107W

Gene

YOL107W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 84 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciYEAST:G3O-33504-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized membrane protein YOL107W
    Gene namesi
    Ordered Locus Names:YOL107W
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome XV

    Organism-specific databases

    CYGDiYOL107w.
    SGDiS000005467. YOL107W.

    Subcellular locationi

    Golgi apparatus membrane 1 Publication; Multi-pass membrane protein 1 Publication

    GO - Cellular componenti

    1. Golgi membrane Source: UniProtKB-SubCell
    2. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Golgi apparatus, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 342342Uncharacterized membrane protein YOL107WPRO_0000235931Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi114 – 1141N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PaxDbiQ12239.

    Expressioni

    Gene expression databases

    GenevestigatoriQ12239.

    Interactioni

    Protein-protein interaction databases

    BioGridi34294. 15 interactions.
    DIPiDIP-4218N.
    IntActiQ12239. 2 interactions.
    MINTiMINT-554964.
    STRINGi4932.YOL107W.

    Structurei

    3D structure databases

    ProteinModelPortaliQ12239.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 2121CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini43 – 12179LumenalSequence AnalysisAdd
    BLAST
    Topological domaini143 – 15917CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini181 – 20727LumenalSequence AnalysisAdd
    BLAST
    Topological domaini229 – 342114CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei22 – 4221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei122 – 14221HelicalSequence AnalysisAdd
    BLAST
    Transmembranei160 – 18021HelicalSequence AnalysisAdd
    BLAST
    Transmembranei208 – 22821HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG251000.
    GeneTreeiENSGT00390000002470.
    HOGENOMiHOG000065992.
    OMAiPEHNIVL.
    OrthoDBiEOG72RN8C.

    Family and domain databases

    InterProiIPR013861. DUF1751_Mem_euk.
    [Graphical view]
    PfamiPF08551. DUF1751. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q12239-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQYSSRFLEL NIPDSFLNIN KIPDATKFIT VTYICLTATL FCIRRSLYNK    50
    LVLEDPNLDY NLITSPLLQM VPSQIWRYPT SLVLSNFIDT KAWKVVVNLL 100
    NLIIGGSFIE RNWNSSKEMF KFIIVLGSLT NVLIIMLTLL VSFFSNKVRL 150
    DIPLDGNYTI LIGFPIIYRQ LLPETTIIHL KTPQFLAKNF RFKLLPIFVM 200
    FTMTVTQIIW FHHFAQLFSI WVTFFASWSY LRFFQKLAPL NCPSLPTTNS 250
    QGGQEILVGD ASDTFQLIYF FPDLIKPILR PIFNFIYNVV VVKFKVIKPF 300
    HDIDIDIGNT IAESRGAKKI MTVEERRRQL ALQVLEERMV NP 342
    Length:342
    Mass (Da):39,742
    Last modified:November 1, 1996 - v1
    Checksum:i75C352C4CE35DC57
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z48149 Genomic DNA. Translation: CAA88154.1.
    Z74849 Genomic DNA. Translation: CAA99126.1.
    BK006948 Genomic DNA. Translation: DAA10676.1.
    PIRiS51891.
    RefSeqiNP_014534.1. NM_001183361.1.

    Genome annotation databases

    EnsemblFungiiYOL107W; YOL107W; YOL107W.
    GeneIDi854043.
    KEGGisce:YOL107W.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z48149 Genomic DNA. Translation: CAA88154.1 .
    Z74849 Genomic DNA. Translation: CAA99126.1 .
    BK006948 Genomic DNA. Translation: DAA10676.1 .
    PIRi S51891.
    RefSeqi NP_014534.1. NM_001183361.1.

    3D structure databases

    ProteinModelPortali Q12239.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 34294. 15 interactions.
    DIPi DIP-4218N.
    IntActi Q12239. 2 interactions.
    MINTi MINT-554964.
    STRINGi 4932.YOL107W.

    Proteomic databases

    PaxDbi Q12239.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YOL107W ; YOL107W ; YOL107W .
    GeneIDi 854043.
    KEGGi sce:YOL107W.

    Organism-specific databases

    CYGDi YOL107w.
    SGDi S000005467. YOL107W.

    Phylogenomic databases

    eggNOGi NOG251000.
    GeneTreei ENSGT00390000002470.
    HOGENOMi HOG000065992.
    OMAi PEHNIVL.
    OrthoDBi EOG72RN8C.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-33504-MONOMER.

    Miscellaneous databases

    NextBioi 975615.
    PROi Q12239.

    Gene expression databases

    Genevestigatori Q12239.

    Family and domain databases

    InterProi IPR013861. DUF1751_Mem_euk.
    [Graphical view ]
    Pfami PF08551. DUF1751. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of a 44 kb DNA fragment of yeast chromosome XV including the Ty1-H3 retrotransposon, the suf1(+) frameshift suppressor gene for tRNA-Gly, the yeast transfer RNA-Thr-1a and a delta element."
      Vandenbol M., Durand P., Portetelle D., Hilger F.
      Yeast 11:1069-1075(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 96604 / S288c / FY1679.
    2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XV."
      Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D.
      , de Haan M., Delius H., Durand P., Fairhead C., Feldmann H., Gaillon L., Galisson F., Gamo F.-J., Gancedo C., Goffeau A., Goulding S.E., Grivell L.A., Habbig B., Hand N.J., Hani J., Hattenhorst U., Hebling U., Hernando Y., Herrero E., Heumann K., Hiesel R., Hilger F., Hofmann B., Hollenberg C.P., Hughes B., Jauniaux J.-C., Kalogeropoulos A., Katsoulou C., Kordes E., Lafuente M.J., Landt O., Louis E.J., Maarse A.C., Madania A., Mannhaupt G., Marck C., Martin R.P., Mewes H.-W., Michaux G., Paces V., Parle-McDermott A.G., Pearson B.M., Perrin A., Pettersson B., Poch O., Pohl T.M., Poirey R., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rechmann S., Schwager C., Schweizer M., Sor F., Sterky F., Tarassov I.A., Teodoru C., Tettelin H., Thierry A., Tobiasch E., Tzermia M., Uhlen M., Unseld M., Valens M., Vandenbol M., Vetter I., Vlcek C., Voet M., Volckaert G., Voss H., Wambutt R., Wedler H., Wiemann S., Winsor B., Wolfe K.H., Zollner A., Zumstein E., Kleine K.
      Nature 387:98-102(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
    5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
    6. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
      Kim H., Melen K., Oesterberg M., von Heijne G.
      Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
      Strain: ATCC 208353 / W303-1A.

    Entry informationi

    Entry nameiYO107_YEAST
    AccessioniPrimary (citable) accession number: Q12239
    Secondary accession number(s): D6W1W0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 16, 2006
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 84 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Miscellaneous

    Present with 1630 molecules/cell in log phase SD medium.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome XV
      Yeast (Saccharomyces cerevisiae) chromosome XV: entries and gene names

    External Data

    Dasty 3