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Q12239

- YO107_YEAST

UniProt

Q12239 - YO107_YEAST

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Protein
Uncharacterized membrane protein YOL107W
Gene
YOL107W
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-33504-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized membrane protein YOL107W
Gene namesi
Ordered Locus Names:YOL107W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome XV

Organism-specific databases

CYGDiYOL107w.
SGDiS000005467. YOL107W.

Subcellular locationi

Golgi apparatus membrane; Multi-pass membrane protein 1 Publication

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 2121Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei22 – 4221Helical; Reviewed prediction
Add
BLAST
Topological domaini43 – 12179Lumenal Reviewed prediction
Add
BLAST
Transmembranei122 – 14221Helical; Reviewed prediction
Add
BLAST
Topological domaini143 – 15917Cytoplasmic Reviewed prediction
Add
BLAST
Transmembranei160 – 18021Helical; Reviewed prediction
Add
BLAST
Topological domaini181 – 20727Lumenal Reviewed prediction
Add
BLAST
Transmembranei208 – 22821Helical; Reviewed prediction
Add
BLAST
Topological domaini229 – 342114Cytoplasmic Reviewed prediction
Add
BLAST

GO - Cellular componenti

  1. Golgi membrane Source: UniProtKB-SubCell
  2. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 342342Uncharacterized membrane protein YOL107W
PRO_0000235931Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi114 – 1141N-linked (GlcNAc...) Reviewed prediction

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ12239.

Expressioni

Gene expression databases

GenevestigatoriQ12239.

Interactioni

Protein-protein interaction databases

BioGridi34294. 15 interactions.
DIPiDIP-4218N.
IntActiQ12239. 2 interactions.
MINTiMINT-554964.
STRINGi4932.YOL107W.

Structurei

3D structure databases

ProteinModelPortaliQ12239.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG251000.
GeneTreeiENSGT00390000002470.
HOGENOMiHOG000065992.
OMAiPEHNIVL.
OrthoDBiEOG72RN8C.

Family and domain databases

InterProiIPR013861. DUF1751_Mem_euk.
[Graphical view]
PfamiPF08551. DUF1751. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q12239-1 [UniParc]FASTAAdd to Basket

« Hide

MQYSSRFLEL NIPDSFLNIN KIPDATKFIT VTYICLTATL FCIRRSLYNK    50
LVLEDPNLDY NLITSPLLQM VPSQIWRYPT SLVLSNFIDT KAWKVVVNLL 100
NLIIGGSFIE RNWNSSKEMF KFIIVLGSLT NVLIIMLTLL VSFFSNKVRL 150
DIPLDGNYTI LIGFPIIYRQ LLPETTIIHL KTPQFLAKNF RFKLLPIFVM 200
FTMTVTQIIW FHHFAQLFSI WVTFFASWSY LRFFQKLAPL NCPSLPTTNS 250
QGGQEILVGD ASDTFQLIYF FPDLIKPILR PIFNFIYNVV VVKFKVIKPF 300
HDIDIDIGNT IAESRGAKKI MTVEERRRQL ALQVLEERMV NP 342
Length:342
Mass (Da):39,742
Last modified:November 1, 1996 - v1
Checksum:i75C352C4CE35DC57
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z48149 Genomic DNA. Translation: CAA88154.1.
Z74849 Genomic DNA. Translation: CAA99126.1.
BK006948 Genomic DNA. Translation: DAA10676.1.
PIRiS51891.
RefSeqiNP_014534.1. NM_001183361.1.

Genome annotation databases

EnsemblFungiiYOL107W; YOL107W; YOL107W.
GeneIDi854043.
KEGGisce:YOL107W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z48149 Genomic DNA. Translation: CAA88154.1 .
Z74849 Genomic DNA. Translation: CAA99126.1 .
BK006948 Genomic DNA. Translation: DAA10676.1 .
PIRi S51891.
RefSeqi NP_014534.1. NM_001183361.1.

3D structure databases

ProteinModelPortali Q12239.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 34294. 15 interactions.
DIPi DIP-4218N.
IntActi Q12239. 2 interactions.
MINTi MINT-554964.
STRINGi 4932.YOL107W.

Proteomic databases

PaxDbi Q12239.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii YOL107W ; YOL107W ; YOL107W .
GeneIDi 854043.
KEGGi sce:YOL107W.

Organism-specific databases

CYGDi YOL107w.
SGDi S000005467. YOL107W.

Phylogenomic databases

eggNOGi NOG251000.
GeneTreei ENSGT00390000002470.
HOGENOMi HOG000065992.
OMAi PEHNIVL.
OrthoDBi EOG72RN8C.

Enzyme and pathway databases

BioCyci YEAST:G3O-33504-MONOMER.

Miscellaneous databases

NextBioi 975615.
PROi Q12239.

Gene expression databases

Genevestigatori Q12239.

Family and domain databases

InterProi IPR013861. DUF1751_Mem_euk.
[Graphical view ]
Pfami PF08551. DUF1751. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence analysis of a 44 kb DNA fragment of yeast chromosome XV including the Ty1-H3 retrotransposon, the suf1(+) frameshift suppressor gene for tRNA-Gly, the yeast transfer RNA-Thr-1a and a delta element."
    Vandenbol M., Durand P., Portetelle D., Hilger F.
    Yeast 11:1069-1075(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 96604 / S288c / FY1679.
  2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XV."
    Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D.
    , de Haan M., Delius H., Durand P., Fairhead C., Feldmann H., Gaillon L., Galisson F., Gamo F.-J., Gancedo C., Goffeau A., Goulding S.E., Grivell L.A., Habbig B., Hand N.J., Hani J., Hattenhorst U., Hebling U., Hernando Y., Herrero E., Heumann K., Hiesel R., Hilger F., Hofmann B., Hollenberg C.P., Hughes B., Jauniaux J.-C., Kalogeropoulos A., Katsoulou C., Kordes E., Lafuente M.J., Landt O., Louis E.J., Maarse A.C., Madania A., Mannhaupt G., Marck C., Martin R.P., Mewes H.-W., Michaux G., Paces V., Parle-McDermott A.G., Pearson B.M., Perrin A., Pettersson B., Poch O., Pohl T.M., Poirey R., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rechmann S., Schwager C., Schweizer M., Sor F., Sterky F., Tarassov I.A., Teodoru C., Tettelin H., Thierry A., Tobiasch E., Tzermia M., Uhlen M., Unseld M., Valens M., Vandenbol M., Vetter I., Vlcek C., Voet M., Volckaert G., Voss H., Wambutt R., Wedler H., Wiemann S., Winsor B., Wolfe K.H., Zollner A., Zumstein E., Kleine K.
    Nature 387:98-102(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  4. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  5. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  6. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
    Kim H., Melen K., Oesterberg M., von Heijne G.
    Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: ATCC 208353 / W303-1A.

Entry informationi

Entry nameiYO107_YEAST
AccessioniPrimary (citable) accession number: Q12239
Secondary accession number(s): D6W1W0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: November 1, 1996
Last modified: May 14, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 1630 molecules/cell in log phase SD medium.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XV
    Yeast (Saccharomyces cerevisiae) chromosome XV: entries and gene names

External Data

Dasty 3

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