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Q12195

- YD015_YEAST

UniProt

Q12195 - YD015_YEAST

Protein

Putative uncharacterized protein YDR015C

Gene

YDR015C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 1 out of 5- Protein uncertaini
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative uncharacterized protein YDR015C
    Gene namesi
    Ordered Locus Names:YDR015C
    ORF Names:PZF129
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome IV

    Organism-specific databases

    SGDiS000002422. YDR015C.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 7979Putative uncharacterized protein YDR015CPRO_0000299869Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriQ12195.

    Interactioni

    Protein-protein interaction databases

    IntActiQ12195. 1 interaction.

    Structurei

    3D structure databases

    ProteinModelPortaliQ12195.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    OrthoDBiEOG7B05VZ.

    Sequencei

    Sequence statusi: Complete.

    Q12195-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSCSFHISSP LGSSSSLEGF SSLKVVVVAC QALSRDLLGI DLVLLLLFWR   50
    PDKHPHWGFR HLCSQTDFWH EVVVFPIPN 79
    Length:79
    Mass (Da):8,892
    Last modified:June 16, 2009 - v2
    Checksum:i60BD6E085BCFFAEB
    GO

    Sequence cautioni

    The sequence CAA65207.1 differs from that shown. Reason: Frameshift at position 58.
    The sequence CAA98835.1 differs from that shown. Reason: Frameshift at position 58.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X95966 Genomic DNA. Translation: CAA65207.1. Frameshift.
    Z74311 Genomic DNA. Translation: CAA98835.1. Frameshift.
    BK006938 Genomic DNA. No translation available.
    PIRiS63422.

    Genome annotation databases

    EnsemblFungiiYDR015C; YDR015C; YDR015C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X95966 Genomic DNA. Translation: CAA65207.1 . Frameshift.
    Z74311 Genomic DNA. Translation: CAA98835.1 . Frameshift.
    BK006938 Genomic DNA. No translation available.
    PIRi S63422.

    3D structure databases

    ProteinModelPortali Q12195.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q12195. 1 interaction.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YDR015C ; YDR015C ; YDR015C .

    Organism-specific databases

    SGDi S000002422. YDR015C.

    Phylogenomic databases

    OrthoDBi EOG7B05VZ.

    Gene expression databases

    Genevestigatori Q12195.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Sequencing and analysis of a 35.4 kb region on the right arm of chromosome IV from Saccharomyces cerevisiae reveal 23 open reading frames."
      Eide L.G., Sander C., Prydz H.
      Yeast 12:1085-1090(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome IV."
      Jacq C., Alt-Moerbe J., Andre B., Arnold W., Bahr A., Ballesta J.P.G., Bargues M., Baron L., Becker A., Biteau N., Bloecker H., Blugeon C., Boskovic J., Brandt P., Brueckner M., Buitrago M.J., Coster F., Delaveau T.
      , del Rey F., Dujon B., Eide L.G., Garcia-Cantalejo J.M., Goffeau A., Gomez-Peris A., Granotier C., Hanemann V., Hankeln T., Hoheisel J.D., Jaeger W., Jimenez A., Jonniaux J.-L., Kraemer C., Kuester H., Laamanen P., Legros Y., Louis E.J., Moeller-Rieker S., Monnet A., Moro M., Mueller-Auer S., Nussbaumer B., Paricio N., Paulin L., Perea J., Perez-Alonso M., Perez-Ortin J.E., Pohl T.M., Prydz H., Purnelle B., Rasmussen S.W., Remacha M.A., Revuelta J.L., Rieger M., Salom D., Saluz H.P., Saiz J.E., Saren A.-M., Schaefer M., Scharfe M., Schmidt E.R., Schneider C., Scholler P., Schwarz S., Soler-Mira A., Urrestarazu L.A., Verhasselt P., Vissers S., Voet M., Volckaert G., Wagner G., Wambutt R., Wedler E., Wedler H., Woelfl S., Harris D.E., Bowman S., Brown D., Churcher C.M., Connor R., Dedman K., Gentles S., Hamlin N., Hunt S., Jones L., McDonald S., Murphy L.D., Niblett D., Odell C., Oliver K., Rajandream M.A., Richards C., Shore L., Walsh S.V., Barrell B.G., Dietrich F.S., Mulligan J.T., Allen E., Araujo R., Aviles E., Berno A., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M., Hunicke-Smith S., Hyman R.W., Komp C., Lashkari D., Lew H., Lin D., Mosedale D., Nakahara K., Namath A., Oefner P., Oh C., Petel F.X., Roberts D., Schramm S., Schroeder M., Shogren T., Shroff N., Winant A., Yelton M.A., Botstein D., Davis R.W., Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Du Z., Favello A., Fulton L., Gattung S., Greco T., Hallsworth K., Hawkins J., Hillier L.W., Jier M., Johnson D., Johnston L., Kirsten J., Kucaba T., Langston Y., Latreille P., Le T., Mardis E., Menezes S., Miller N., Nhan M., Pauley A., Peluso D., Rifkin L., Riles L., Taich A., Trevaskis E., Vignati D., Wilcox L., Wohldman P., Vaudin M., Wilson R., Waterston R., Albermann K., Hani J., Heumann K., Kleine K., Mewes H.-W., Zollner A., Zaccaria P.
      Nature 387:75-78(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. "Budding yeast Hed1 down-regulates the mitotic recombination machinery when meiotic recombination is impaired."
      Tsubouchi H., Roeder G.S.
      Genes Dev. 20:1766-1775(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: IDENTIFICATION OF FRAMESHIFT.

    Entry informationi

    Entry nameiYD015_YEAST
    AccessioniPrimary (citable) accession number: Q12195
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 11, 2007
    Last sequence update: June 16, 2009
    Last modified: October 1, 2014
    This is version 43 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Caution

    Product of a dubious gene prediction. Partially overlaps HED1.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome IV
      Yeast (Saccharomyces cerevisiae) chromosome IV: entries and gene names

    External Data

    Dasty 3