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Protein

Zinc finger protein YPR013C

Gene

YPR013C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri254 – 276C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri282 – 306C2H2-type 2PROSITE-ProRule annotationAdd BLAST25

GO - Molecular functioni

  • DNA binding Source: SGD
  • metal ion binding Source: UniProtKB-KW

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyciYEAST:G3O-34174-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein YPR013C
Gene namesi
Ordered Locus Names:YPR013C
ORF Names:LPZ12c
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XVI

Organism-specific databases

EuPathDBiFungiDB:YPR013C.
SGDiS000006217. YPR013C.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002559741 – 317Zinc finger protein YPR013CAdd BLAST317

Proteomic databases

PRIDEiQ12145.

Interactioni

Protein-protein interaction databases

BioGridi36191. 108 interactors.
IntActiQ12145. 3 interactors.
MINTiMINT-517882.
STRINGi4932.YPR013C.

Structurei

3D structure databases

ProteinModelPortaliQ12145.
SMRiQ12145.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri254 – 276C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri282 – 306C2H2-type 2PROSITE-ProRule annotationAdd BLAST25

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

GeneTreeiENSGT00730000113475.
InParanoidiQ12145.
OrthoDBiEOG092C3GZE.

Family and domain databases

InterProiView protein in InterPro
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 2 hits.
SUPFAMiSSF57667. SSF57667. 2 hits.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Q12145-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNFSLSKQSS EKQSSYTDKS RSPNIGMCTV NYKSNLPLQV SAVDQLSTGK
60 70 80 90 100
GTQFYGHNSY KNERECYNST KINLPPISSL LPNFENNTPP NVDSRVQFPP
110 120 130 140 150
QQVYQSMNVV PIVNEIYTPI SMNATSDQYP IYYTESQQPI PHSQSPHLTS
160 170 180 190 200
SAPLMMPVMV PTVYKPLTPY DKEPITIASE PNFTAISMAS HPNAALELCH
210 220 230 240 250
DRPKSVPPGY GVLPTMQEAS NGRTKSEPGA VLNGSATFSD WKTDTRISST
260 270 280 290 300
KLRKQCPVCG KICSRPSTLK THYLIHTGDT PFKCTWEGCT KSFNVKSNML
310
RHLKSHERKR NKVLNTT
Length:317
Mass (Da):35,358
Last modified:November 1, 1996 - v1
Checksum:iF12CF522C7C889FE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U31900 Genomic DNA. Translation: AAA97591.1.
Z49919 Genomic DNA. Translation: CAA90157.1.
Z71255 Genomic DNA. Translation: CAA95009.1.
BK006949 Genomic DNA. Translation: DAA11440.1.
PIRiS57546.
RefSeqiNP_015338.1. NM_001184110.1.

Genome annotation databases

EnsemblFungiiYPR013C; YPR013C; YPR013C.
GeneIDi856123.
KEGGisce:YPR013C.

Similar proteinsi

Entry informationi

Entry nameiYP013_YEAST
AccessioniPrimary (citable) accession number: Q12145
Secondary accession number(s): D6W424
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: November 1, 1996
Last modified: September 27, 2017
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names