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Reviewed, UniProtKB/Swiss-Prot Q12125 (YO164_YEAST)

Last modified June 16, 2009. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    UPF0363 protein YOR164C
Gene names
Ordered Locus Names: YOR164C
ORF Names: O3580
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

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Protein attributes

Sequence length312 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

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General annotation (Comments)

Subcellular location

Cytoplasm. Ref.4

Miscellaneous

Present with 5350 molecules/cell in log phase SD medium. Ref.5

Sequence similarities

Belongs to the UPF0363 family.

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Ontologies

Keywords
   Cellular componentCytoplasm
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm Ref.4

Inferred from direct assay. Source: SGD

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

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Binary interactions

With

Entry

#Exp.

IntAct

Notes

P326181EBI-36940,EBI-22354
GET3Q121541EBI-36940,EBI-2989

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 312312UPF0363 protein YOR164C
PRO_0000228107

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Sequences

Sequence LengthMass (Da)Tools
Q12125-1 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 98AFFDB4EA51B40F

FASTA31236,280
        10         20         30         40         50         60 
MVPAESNAVQ AKLAKTLQRF ENKIKAGDYY EAHQTLRTIA NRYVRSKSYE HAIELISQGA 

        70         80         90        100        110        120 
LSFLKAKQGG SGTDLIFYLL EVYDLAEVKV DDISVARLVR LIAELDPSEP NLKDVITGMN 

       130        140        150        160        170        180 
NWSIKFSEYK FGDPYLHNTI GSKLLEGDFV YEAERYFMLG THDSMIKYVD LLWDWLCQVD 

       190        200        210        220        230        240 
DIEDSTVAEF FSRLVFNYLF ISNISFAHES KDIFLERFIE KFHPKYEKID KNGYEIVFFE 

       250        260        270        280        290        300 
DYSDLNFLQL LLITCQTKDK SYFLNLKNHY LDFSQAYKSE LEFLGQEYFN IVAPKQTNFL 

       310 
QDMMSGFLGG SK

« Hide

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References

« Hide 'large scale' references
[1]"Analysis of a 22,956 bp region on the right arm of Saccharomyces cerevisiae chromosome XV."
Madania A., Poch O., Tarassov I.A., Winsor B., Martin R.P.
Yeast 12:1563-1573(1996) [PubMed: 8972579] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: S288c / FY1678.
[2]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XV."
Dujon B., Albermann K., Aldea M., Alexandraki D., Ansorge W., Arino J., Benes V., Bohn C., Bolotin-Fukuhara M., Bordonne R., Boyer J., Camasses A., Casamayor A., Casas C., Cheret G., Cziepluch C., Daignan-Fornier B., Dang V.-D. expand/collapse author list , de Haan M., Delius H., Durand P., Fairhead C., Feldmann H., Gaillon L., Galisson F., Gamo F.-J., Gancedo C., Goffeau A., Goulding S.E., Grivell L.A., Habbig B., Hand N.J., Hani J., Hattenhorst U., Hebling U., Hernando Y., Herrero E., Heumann K., Hiesel R., Hilger F., Hofmann B., Hollenberg C.P., Hughes B., Jauniaux J.-C., Kalogeropoulos A., Katsoulou C., Kordes E., Lafuente M.J., Landt O., Louis E.J., Maarse A.C., Madania A., Mannhaupt G., Marck C., Martin R.P., Mewes H.-W., Michaux G., Paces V., Parle-McDermott A.G., Pearson B.M., Perrin A., Pettersson B., Poch O., Pohl T.M., Poirey R., Portetelle D., Pujol A., Purnelle B., Ramezani Rad M., Rechmann S., Schwager C., Schweizer M., Sor F., Sterky F., Tarassov I.A., Teodoru C., Tettelin H., Thierry A., Tobiasch E., Tzermia M., Uhlen M., Unseld M., Valens M., Vandenbol M., Vetter I., Vlcek C., Voet M., Volckaert G., Voss H., Wambutt R., Wedler H., Wiemann S., Winsor B., Wolfe K.H., Zollner A., Zumstein E., Kleine K.
Nature 387:98-102(1997) [PubMed: 9169874] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 96604 / S288c / FY1679.
[3]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed: 17322287] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[4]"Global analysis of protein localization in budding yeast."
Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K.
Nature 425:686-691(2003) [PubMed: 14562095] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[5]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed: 14562106] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

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Cross-references

Sequence databases

U55021 Genomic DNA. Translation: AAB47411.1.
Z75072 Genomic DNA. Translation: CAA99370.1.
AY558036 Genomic DNA. Translation: AAS56362.1.
PIRS67052.
RefSeqNP_014807.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:2005N.
IntActQ12125. 14 interactions.

Proteomic databases

PeptideAtlasQ12125.
PRIDEQ12125.

Genome annotation databases

EnsemblYOR164C. Saccharomyces cerevisiae. [Contig view]
GeneID854335.
GenomeReviewsGene locus YOR164C in contig Y13140_GR.
KEGGsce:YOR164C.
NMPDRfig|4932.3.peg.5915.

Organism-specific databases

CYGDYOR164c.
SGDS000005690. YOR164C.
Yeast-GFPSearch...

Phylogenomic databases

HOGENOMQ12125.
OMAQ12125. YEAHQTL.

Gene expression databases

ArrayExpressQ12125.
GermOnlineYOR164C. Saccharomyces cerevisiae.

Family and domain databases

InterProIPR007317. UPF0363.
[Graphical view]
PANTHERPTHR12875. DUF410. 1 hit.
PfamPF04190. DUF410. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio976399.

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Entry information

Entry nameYO164_YEAST
AccessionPrimary (citable) accession number: Q12125
Entry history
Integrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: November 1, 1996
Last modified: June 16, 2009
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

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Relevant documents

SIMILARITY comments

Index of protein domains and families

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents