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Q11YM9

- Q11YM9_CYTH3

UniProt

Q11YM9 - Q11YM9_CYTH3

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Protein
Submitted name:

Sigma factor sigB regulation protein

Gene
rsbU, CHU_0195
Organism
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCHUT269798:GJ83-206-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor sigB regulation proteinImported
Gene namesi
Name:rsbUImported
Ordered Locus Names:CHU_0195Imported
OrganismiCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)Imported
Taxonomic identifieri269798 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga
ProteomesiUP000001822: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269798.CHU_0195.

Structurei

3D structure databases

ProteinModelPortaliQ11YM9.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000121178.
OMAiITIFLAN.
OrthoDBiEOG66HVHQ.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

Q11YM9-1 [UniParc]FASTAAdd to Basket

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MNLKNLRNIY FLLAFVSWVL ILADDITVIR LAQPIIPSYF SDILVNTFLS    50
TFFLFTFLGF KIEIGLKRSG NFNDLLWQVF IIGAITVLIS LIIKSIGIFS 100
NNDFFIYDPL VSNILYHINI GIITIFLANG YYVWKKMILY QKTKRTDVIW 150
HIFEYLTLIS IVSNFFFFDI TDPYFLIFTS PITILGLICA FNLKWVAFLT 200
YKQKWRSILL LSLIIIISLS FLERVYAHHI ISNLLIDLAE NVFIQAIFGF 250
MLMNCIVALL VLLFNLPTSS VFEQKFGEVM LFQKLHQSLQ VGEKEEDMYE 300
LLISSSMTTV MADAAWLEIR DNKGGLKAFQ NSNIDEYDVF EIKKALRKNQ 350
VNISSEPQYI KDILSYPHTE KIKHLDYKSF LLIPLTSNNQ LIGTLVLLKN 400
LNDGFDKEMV DIIFTFVSQA SISIKNFRLM SDAIQTERYQ EELKIAKDVQ 450
QSLLPASLYL NNAVQLSVYS KGAKEVGGDY YDVYELSPTR FAIVIGDVSG 500
HGTSAAFNMA QMKGVFQSLV SLDLPVDEFM VLANNALGRC LERKSFITLS 550
LFVLNTETQS IQYARAGHCP AILIDSKNNE ALFLDGKGLG LGLSRNNTYE 600
KHINKYELSY SSNDVLILYT DGLVEAHNLA RDEYGYERLK QMGLESSADK 650
PRQIIDTIIE NVQHFSGSTQ FEDDCTLLVM KFS 683
Length:683
Mass (Da):77,980
Last modified:August 22, 2006 - v1
Checksum:iD4DB84E61EC0672C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000383 Genomic DNA. Translation: ABG57487.1.
RefSeqiYP_676827.1. NC_008255.1.

Genome annotation databases

EnsemblBacteriaiABG57487; ABG57487; CHU_0195.
GeneIDi4185574.
KEGGichu:CHU_0195.
PATRICi21591219. VBICytHut34013_0188.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000383 Genomic DNA. Translation: ABG57487.1 .
RefSeqi YP_676827.1. NC_008255.1.

3D structure databases

ProteinModelPortali Q11YM9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 269798.CHU_0195.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG57487 ; ABG57487 ; CHU_0195 .
GeneIDi 4185574.
KEGGi chu:CHU_0195.
PATRICi 21591219. VBICytHut34013_0188.

Phylogenomic databases

eggNOGi COG2208.
HOGENOMi HOG000121178.
OMAi ITIFLAN.
OrthoDBi EOG66HVHQ.

Enzyme and pathway databases

BioCyci CHUT269798:GJ83-206-MONOMER.

Family and domain databases

Gene3Di 3.30.450.40. 1 hit.
InterProi IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view ]
Pfami PF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view ]
SMARTi SM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33406 / NCIMB 9469.

Entry informationi

Entry nameiQ11YM9_CYTH3
AccessioniPrimary (citable) accession number: Q11YM9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: June 11, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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