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Protein
Submitted name:

Sigma factor sigB regulation protein

Gene

rsbU

Organism
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCHUT269798:GJ83-206-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor sigB regulation proteinImported
Gene namesi
Name:rsbUImported
Ordered Locus Names:CHU_0195Imported
OrganismiCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)Imported
Taxonomic identifieri269798 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga
ProteomesiUP000001822: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269798.CHU_0195.

Structurei

3D structure databases

ProteinModelPortaliQ11YM9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000121178.
OMAiKQKWRSI.
OrthoDBiEOG66HVHQ.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

Q11YM9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNLKNLRNIY FLLAFVSWVL ILADDITVIR LAQPIIPSYF SDILVNTFLS
60 70 80 90 100
TFFLFTFLGF KIEIGLKRSG NFNDLLWQVF IIGAITVLIS LIIKSIGIFS
110 120 130 140 150
NNDFFIYDPL VSNILYHINI GIITIFLANG YYVWKKMILY QKTKRTDVIW
160 170 180 190 200
HIFEYLTLIS IVSNFFFFDI TDPYFLIFTS PITILGLICA FNLKWVAFLT
210 220 230 240 250
YKQKWRSILL LSLIIIISLS FLERVYAHHI ISNLLIDLAE NVFIQAIFGF
260 270 280 290 300
MLMNCIVALL VLLFNLPTSS VFEQKFGEVM LFQKLHQSLQ VGEKEEDMYE
310 320 330 340 350
LLISSSMTTV MADAAWLEIR DNKGGLKAFQ NSNIDEYDVF EIKKALRKNQ
360 370 380 390 400
VNISSEPQYI KDILSYPHTE KIKHLDYKSF LLIPLTSNNQ LIGTLVLLKN
410 420 430 440 450
LNDGFDKEMV DIIFTFVSQA SISIKNFRLM SDAIQTERYQ EELKIAKDVQ
460 470 480 490 500
QSLLPASLYL NNAVQLSVYS KGAKEVGGDY YDVYELSPTR FAIVIGDVSG
510 520 530 540 550
HGTSAAFNMA QMKGVFQSLV SLDLPVDEFM VLANNALGRC LERKSFITLS
560 570 580 590 600
LFVLNTETQS IQYARAGHCP AILIDSKNNE ALFLDGKGLG LGLSRNNTYE
610 620 630 640 650
KHINKYELSY SSNDVLILYT DGLVEAHNLA RDEYGYERLK QMGLESSADK
660 670 680
PRQIIDTIIE NVQHFSGSTQ FEDDCTLLVM KFS
Length:683
Mass (Da):77,980
Last modified:August 22, 2006 - v1
Checksum:iD4DB84E61EC0672C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000383 Genomic DNA. Translation: ABG57487.1.
RefSeqiWP_011583603.1. NC_008255.1.
YP_676827.1. NC_008255.1.

Genome annotation databases

EnsemblBacteriaiABG57487; ABG57487; CHU_0195.
GeneIDi4185574.
KEGGichu:CHU_0195.
PATRICi21591219. VBICytHut34013_0188.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000383 Genomic DNA. Translation: ABG57487.1.
RefSeqiWP_011583603.1. NC_008255.1.
YP_676827.1. NC_008255.1.

3D structure databases

ProteinModelPortaliQ11YM9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269798.CHU_0195.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG57487; ABG57487; CHU_0195.
GeneIDi4185574.
KEGGichu:CHU_0195.
PATRICi21591219. VBICytHut34013_0188.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000121178.
OMAiKQKWRSI.
OrthoDBiEOG66HVHQ.

Enzyme and pathway databases

BioCyciCHUT269798:GJ83-206-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33406 / NCIMB 9469Imported.

Entry informationi

Entry nameiQ11YM9_CYTH3
AccessioniPrimary (citable) accession number: Q11YM9
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: January 7, 2015
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.