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Q11YM9 (Q11YM9_CYTH3) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:rsbU EMBL ABG57487.1
Ordered Locus Names:CHU_0195 EMBL ABG57487.1
OrganismCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) [Complete proteome] [HAMAP] EMBL ABG57487.1
Taxonomic identifier269798 [NCBI]
Taxonomic lineageBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga

Protein attributes

Sequence length683 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q11YM9 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: D4DB84E61EC0672C

FASTA68377,980
        10         20         30         40         50         60 
MNLKNLRNIY FLLAFVSWVL ILADDITVIR LAQPIIPSYF SDILVNTFLS TFFLFTFLGF 

        70         80         90        100        110        120 
KIEIGLKRSG NFNDLLWQVF IIGAITVLIS LIIKSIGIFS NNDFFIYDPL VSNILYHINI 

       130        140        150        160        170        180 
GIITIFLANG YYVWKKMILY QKTKRTDVIW HIFEYLTLIS IVSNFFFFDI TDPYFLIFTS 

       190        200        210        220        230        240 
PITILGLICA FNLKWVAFLT YKQKWRSILL LSLIIIISLS FLERVYAHHI ISNLLIDLAE 

       250        260        270        280        290        300 
NVFIQAIFGF MLMNCIVALL VLLFNLPTSS VFEQKFGEVM LFQKLHQSLQ VGEKEEDMYE 

       310        320        330        340        350        360 
LLISSSMTTV MADAAWLEIR DNKGGLKAFQ NSNIDEYDVF EIKKALRKNQ VNISSEPQYI 

       370        380        390        400        410        420 
KDILSYPHTE KIKHLDYKSF LLIPLTSNNQ LIGTLVLLKN LNDGFDKEMV DIIFTFVSQA 

       430        440        450        460        470        480 
SISIKNFRLM SDAIQTERYQ EELKIAKDVQ QSLLPASLYL NNAVQLSVYS KGAKEVGGDY 

       490        500        510        520        530        540 
YDVYELSPTR FAIVIGDVSG HGTSAAFNMA QMKGVFQSLV SLDLPVDEFM VLANNALGRC 

       550        560        570        580        590        600 
LERKSFITLS LFVLNTETQS IQYARAGHCP AILIDSKNNE ALFLDGKGLG LGLSRNNTYE 

       610        620        630        640        650        660 
KHINKYELSY SSNDVLILYT DGLVEAHNLA RDEYGYERLK QMGLESSADK PRQIIDTIIE 

       670        680 
NVQHFSGSTQ FEDDCTLLVM KFS 

« Hide

References

[1]"Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii."
Xie G., Bruce D.C., Challacombe J.F., Chertkov O., Detter J.C., Gilna P., Han C.S., Lucas S., Misra M., Myers G.L., Richardson P., Tapia R., Thayer N., Thompson L.S., Brettin T.S., Henrissat B., Wilson D.B., McBride M.J.
Appl. Environ. Microbiol. 73:3536-3546(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33406 / NCIMB 9469.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000383 Genomic DNA. Translation: ABG57487.1.
RefSeqYP_676827.1. NC_008255.1.

3D structure databases

ProteinModelPortalQ11YM9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269798.CHU_0195.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG57487; ABG57487; CHU_0195.
GeneID4185574.
KEGGchu:CHU_0195.
PATRIC21591219. VBICytHut34013_0188.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
HOGENOMHOG000121178.
OMAITIFLAN.
OrthoDBEOG66HVHQ.

Enzyme and pathway databases

BioCycCHUT269798:GJ83-206-MONOMER.

Family and domain databases

Gene3D3.30.450.40. 1 hit.
InterProIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ11YM9_CYTH3
AccessionPrimary (citable) accession number: Q11YM9
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: June 11, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)