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Q11WL3

- Q11WL3_CYTH3

UniProt

Q11WL3 - Q11WL3_CYTH3

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Protein
Submitted name:

D-alanine--D-alanine ligase A

Gene

ddlA

Organism
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Cell wall formation.SAAS annotation

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotation

Cofactori

Note: Binds 2 magnesium or manganese ions per subunit.SAAS annotation

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
  3. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. cell wall organization Source: UniProtKB-KW
  2. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
  3. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotationImported

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradationSAAS annotation, Peptidoglycan synthesisSAAS annotation

Keywords - Ligandi

ATP-bindingSAAS annotation, MagnesiumSAAS annotation, ManganeseSAAS annotation, Metal-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciCHUT269798:GJ83-926-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--D-alanine ligase AImported (EC:6.3.2.4Imported)
Gene namesi
Name:ddlAImported
Ordered Locus Names:CHU_0924Imported
OrganismiCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)Imported
Taxonomic identifieri269798 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga
ProteomesiUP000001822: Chromosome

Subcellular locationi

Cytoplasm SAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi269798.CHU_0924.

Structurei

3D structure databases

ProteinModelPortaliQ11WL3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains ATP-grasp domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG1181.
HOGENOMiHOG000121145.
KOiK01921.
OMAiGTASHEC.
OrthoDBiEOG6ND0KB.

Family and domain databases

Gene3Di3.30.1490.20. 2 hits.
3.30.470.20. 3 hits.
3.40.50.20. 2 hits.
HAMAPiMF_00047. Dala_Dala_lig.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 4 hits.
PF01820. Dala_Dala_lig_N. 2 hits.
[Graphical view]
SUPFAMiSSF52440. SSF52440. 2 hits.
PROSITEiPS50975. ATP_GRASP. 2 hits.
PS00843. DALA_DALA_LIGASE_1. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11WL3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRIGIIFGGQ SREREISFAG GRTVYDNLNK DIFTTVPIFV DSLGQFILLD
60 70 80 90 100
WQYIYKGTIR DFYPPFEFLP KSIHGFQVYV ESLGDLPKEE RDAMIQKVGR
110 120 130 140 150
KIEPSDLKEL IDFAFLALHG PYGEDGAIQG MLDWNNIPYS GSGILPSAIG
160 170 180 190 200
INKYIQKKLV AQASFNGPNY VTYKKSTWLK GADTKALLAH FESSVGFPFV
210 220 230 240 250
VKAPSQGSSI GITVISERNE EKLKQALNRS FFLQEITAAD WNTKTEHAKI
260 270 280 290 300
KWVATLTDIR DGIGMPVNDV LQGKTIYHPE ELLAHLNQSL SSKERVLLES
310 320 330 340 350
LDNEEEIIIE SFIKGQEFSC IVIQDEDGNP IALPPTGIVK GNDFFDYRSK
360 370 380 390 400
YLPGMSRKIT PIDIPGEQVE LIRSECCRLY STLQFNVYAR IDGFISPEGE
410 420 430 440 450
VFLNDPNTTS GMMPSSFFFH QAAEIGLNPS QFLTYIIRTS IQERIKDGKR
460 470 480 490 500
SLRYKQLLAT LDQAISSEKN SSKEKIKIAV VMGGYSSERH ISVESGRNIF
510 520 530 540 550
EKLSSSTKYQ PLPVFLTGSD EQHRLFILPI NILLKDNADD IREKVINFKG
560 570 580 590 600
HHPIIEHIAK ETESISSRYV SNAIKDPKEI SYKELSELVD GVFIALHGRP
610 620 630 640 650
GEDGSMQKEL EKYQLPYNGS GIQSSQITIN KFETNRILRE HGISVANHRM
660 670 680 690 700
VYKQEWLDAG EKLLSEIESG FIYPIIAKPS DDGCSSAVKK IKNRDELRAY
710 720 730 740 750
TRLMFGEEAI QGSVSSSVLG LKYNEEFPQK DYFLIEDLVS KGNAKHFLEV
760 770 780 790 800
TGGLMTRFND KGNVEYEIFE PSESLATGDV LSLEEKFLAG EGQNITPARY
810 820 830 840 850
TTNKADYEQV ASEVRATLKR VAEVLNIQGY ARIDAFVRVF ENNRSETIII
860 870 880 890
EVNSLPGMTP ATCIFHQTAI NGYKPYDFID NILTFGIERE KKKLAKI
Length:897
Mass (Da):101,061
Last modified:August 22, 2006 - v1
Checksum:i74C2C50264BFB669
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000383 Genomic DNA. Translation: ABG58203.1.
RefSeqiWP_011584318.1. NC_008255.1.
YP_677543.1. NC_008255.1.

Genome annotation databases

EnsemblBacteriaiABG58203; ABG58203; CHU_0924.
GeneIDi4184112.
KEGGichu:CHU_0924.
PATRICi21592697. VBICytHut34013_0924.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000383 Genomic DNA. Translation: ABG58203.1 .
RefSeqi WP_011584318.1. NC_008255.1.
YP_677543.1. NC_008255.1.

3D structure databases

ProteinModelPortali Q11WL3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 269798.CHU_0924.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG58203 ; ABG58203 ; CHU_0924 .
GeneIDi 4184112.
KEGGi chu:CHU_0924.
PATRICi 21592697. VBICytHut34013_0924.

Phylogenomic databases

eggNOGi COG1181.
HOGENOMi HOG000121145.
KOi K01921.
OMAi GTASHEC.
OrthoDBi EOG6ND0KB.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci CHUT269798:GJ83-926-MONOMER.

Family and domain databases

Gene3Di 3.30.1490.20. 2 hits.
3.30.470.20. 3 hits.
3.40.50.20. 2 hits.
HAMAPi MF_00047. Dala_Dala_lig.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view ]
PANTHERi PTHR23132. PTHR23132. 1 hit.
Pfami PF07478. Dala_Dala_lig_C. 4 hits.
PF01820. Dala_Dala_lig_N. 2 hits.
[Graphical view ]
SUPFAMi SSF52440. SSF52440. 2 hits.
PROSITEi PS50975. ATP_GRASP. 2 hits.
PS00843. DALA_DALA_LIGASE_1. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33406 / NCIMB 9469Imported.

Entry informationi

Entry nameiQ11WL3_CYTH3
AccessioniPrimary (citable) accession number: Q11WL3
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: November 26, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3