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Q11WI0 (Q11WI0_CYTH3) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL ABG58236.1
Gene names
Name:amyA EMBL ABG58236.1
Ordered Locus Names:CHU_0959 EMBL ABG58236.1
OrganismCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) [Complete proteome] [HAMAP] EMBL ABG58236.1
Taxonomic identifier269798 [NCBI]
Taxonomic lineageBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga

Protein attributes

Sequence length527 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ABG58236.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q11WI0 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 2D2C79D890572607

FASTA52760,288
        10         20         30         40         50         60 
MNSIKDVDLS EITAGKKYWN VERPVEEEVM YFLLIDRFHD GKERISIPST TGFGNTDQLQ 

        70         80         90        100        110        120 
ARCGGTIQGV IKNLKYISAL GFTSIWINPF LQNNPETYHG YSIENFLEVD AQWGTKEDIV 

       130        140        150        160        170        180 
ELVAQAHKLH IKVFFDIVLN HTGNNWSYVK ENPRYNKGKQ YAVKAWRYPD RPIPAELRNL 

       190        200        210        220        230        240 
NLYGRKGGIV KWEETPETWD GDIFELKDLI QDDSEIGHAT LEILIAVYSY WFAVTDCDGF 

       250        260        270        280        290        300 
RIDAAKHIPP KWLNTFVDAM KALTASVHKT SFFIFAEIIS NQSYISKYHT IDGYLDFDFH 

       310        320        330        340        350        360 
FSFVPNMYGE KKRKSAIQSQ PRPVDKVPIR FLDNHDQVGQ MPKHRIAYRM KEKALCNLLR 

       370        380        390        400        410        420 
AFLCMPGIPC IYYGTEQGLK GKGILDGSIR ECLFNPDGKE DILNLDSPYA RVIKEGIHLR 

       430        440        450        460        470        480 
KKLNLYTGDF QSCEIMAAKS HRCIALQVNG LASSKLIVYN LGPHNEVVSI KLSSPLTRTN 

       490        500        510        520 
KLVVYLYSNG DADNDDKTVV NDILHNITMH PYGFKVLELL NHQESVN 

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References

[1]"Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii."
Xie G., Bruce D.C., Challacombe J.F., Chertkov O., Detter J.C., Gilna P., Han C.S., Lucas S., Misra M., Myers G.L., Richardson P., Tapia R., Thayer N., Thompson L.S., Brettin T.S., Henrissat B., Wilson D.B., McBride M.J.
Appl. Environ. Microbiol. 73:3536-3546(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33406 / NCIMB 9469.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000383 Genomic DNA. Translation: ABG58236.1.
RefSeqYP_677576.1. NC_008255.1.

3D structure databases

ProteinModelPortalQ11WI0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269798.CHU_0959.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG58236; ABG58236; CHU_0959.
GeneID4184935.
KEGGchu:CHU_0959.
PATRIC21592767. VBICytHut34013_0959.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
KOK01176.
OrthoDBEOG657J71.

Enzyme and pathway databases

BioCycCHUT269798:GJ83-960-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ11WI0_CYTH3
AccessionPrimary (citable) accession number: Q11WI0
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: November 13, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)