Q11TF9 (Q11TF9_CYTH3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CHU large protein, candidate xylanase, CBM9 module, Glycoside Hydrolase Family 5 protein EMBL ABG59305.1
EC=3.2.1.- EMBL ABG59305.1

Gene names

Ordered Locus Names:

CHU_2042

Organism

Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) [Complete proteome] [HAMAP] EMBL ABG59305.1

Taxonomic identifier

269798 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Cytophaga › Cytophaga hutchinsonii

Protein attributes

Sequence length	1217 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL ABG59305.1
Molecular function	Glycosidase EMBL ABG59305.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q11TF9 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 4DAA42C7A0AD9062	FASTA	1,217	127,406
	10 20 30 40 50 60 MKKLFTVLFY LSTCLVWAQT STVNLTSEKQ YIRGFGGINH PEWAGDMTAV QRTTAFGNGA 70 80 90 100 110 120 GEMGLTVLRI FVNDDKTQWN KALATALRAQ QLGATIFATP WNPPASMCET ITRNNRQEKR 130 140 150 160 170 180 LKPGSYSAYA QHLIDFNNYM KNNGVNLYAM SFANEPDWGF DWTWYSADEV YNFTKNIAGT 190 200 210 220 230 240 LRVNGIKVIT AESFSYNKSY YDKVLNDPTA LSNIDIIGCH LYGSDANSPV SVFNYPLADS 250 260 270 280 290 300 KAPTKERWMT EHYTNSDANS SDLWPSANDV SYEIYRCMVE GQMSVYTWWY IRRQYGPMNE 310 320 330 340 350 360 NGTISKRGYC MAQYSKFIRP GYKRVDATKN PATGVYISAY KKGDDVVVVA INRSTSSQTI 370 380 390 400 410 420 TLSVPGTKVT TWEKYVTSGS KSLAKEANIN SSTGSFQITL DPQSTTSFVG TAPVITTPSP 430 440 450 460 470 480 VVSLTAPVNN TVYTEGDNIT INATATITSG SISKVEFYNG TTLLGTDASS PYSYTITAAA 490 500 510 520 530 540 AGTYPVTAKA TSAANAVTTS TAINIQVAKP IYQTGSAPTI DGTVDGLWSN FPSTGITKNN 550 560 570 580 590 600 TGTISSGTDL SGNWKAMWDA SNLYVLVQVT DDVKRNDGGT DVYNDDGVEV YIDLGNTKAT 610 620 630 640 650 660 TYGTNDQQYT FRWNDVTAAY EINGHPVTGI TKGISNTATG YIVEVSIPWS TIGGTASLNS 670 680 690 700 710 720 FQGFEVMIND DDDGGAREGK LAWVASTDDT WSNPALMGTV VLKGLNCTVP AAAITASTAT 730 740 750 760 770 780 TFCSGGSVVL NAGTGTGYSY VWKNGAATIA GATNSGYTAT ASGSYTVTVT NPGGCSATSA 790 800 810 820 830 840 GTTVTVNALP VLTQYAQVDG GTWNQVSGAT VCAGSSVVLG PQPTVNTGWS WTGPNGYSAS 850 860 870 880 890 900 ARELRLTSVQ TNQGGVYTAS YTDGNTCKST SVFTLTVTAL PAAAITTSTP TTFCAGGSTT 910 920 930 940 950 960 LTAGSGASYK WMNGTVAITG ATAQTYTATA AGSYTVEVTN AGNCKATSAA TVVTVTALPT 970 980 990 1000 1010 1020 ATITATGSTT IPQGGSVALQ ANAGSALTYK WFNGTVAITG ATAQTYTATT AGSYTVEVTN 1030 1040 1050 1060 1070 1080 AGNCKATSAA ATVSVVANQP SVITITSPAP NAAVTGAIDI SVNITDADGS ITLVEFLAGD 1090 1100 1110 1120 1130 1140 DVIGTAAAAP YTYTWDTPTA GSHTITVRVT DSNGGVTTSA PVTVTSESIT TGVQALNTLN 1150 1160 1170 1180 1190 1200 AAVYPNPSNG IVFIDTDADL SDASFTLIDV LGKEGTVFST ATGNGAMIDV SSLAGGTYVL 1210 IVKKDTSVIR KKITVIR

References

[1]

"Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii." Xie G., Bruce D.C., Challacombe J.F., Chertkov O., Detter J.C., Gilna P., Han C.S., Lucas S., Misra M., Myers G.L., Richardson P., Tapia R., Thayer N., Thompson L.S., Brettin T.S., Henrissat B., Wilson D.B., McBride M.J. Appl. Environ. Microbiol. 73:3536-3546(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33406 / NCIMB 9469.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000383 Genomic DNA. Translation: ABG59305.1.
RefSeq	YP_678647.1. NC_008255.1.
3D structure databases
ProteinModelPortal	Q11TF9.
ModBase	Search...
Protein-protein interaction databases
STRING	269798.CHU_2042.
Protein family/group databases
CAZy	CBM9. Carbohydrate-Binding Module Family 9. GH5. Glycoside Hydrolase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG59305; ABG59305; CHU_2042.
GeneID	4186703.
KEGG	chu:CHU_2042.
PATRIC	21594937. VBICytHut34013_2029.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3507.
KO	K15924.
ProtClustDB	CLSK762332.
Enzyme and pathway databases
BioCyc	CHUT269798:GJ83-2047-MONOMER.
Family and domain databases
Gene3D	2.60.40.1180. 1 hit. 2.60.40.1190. 1 hit. 2.60.40.670. 1 hit. 3.20.20.80. 1 hit.
InterPro	IPR010502. Carb-bd_dom_fam9. IPR008960. Carb-bd_dom_fam9-like. IPR015922. Carb-bd_dom_fam9-like_subgr. IPR017868. Filamin/ABP280_repeat-like. IPR013780. Glyco_hydro_13_b. IPR001139. Glyco_hydro_30. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. IPR022409. PKD/Chitinase_dom. IPR000601. PKD_dom. IPR026444. Secre_tail. [Graphical view]
PANTHER	PTHR11069. PTHR11069. 1 hit.
Pfam	PF06452. DUF1083. 1 hit. [Graphical view]
SMART	SM00089. PKD. 3 hits. [Graphical view]
SUPFAM	SSF49344. CBD9-like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit. SSF49299. PKD. 2 hits.
TIGRFAMs	TIGR04183. Por_Secre_tail. 1 hit.
PROSITE	PS50194. FILAMIN_REPEAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q11TF9_CYTH3

Accession

Primary (citable) accession number: Q11TF9

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	May 29, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)