Q11QA0 (Q11QA0_CYTH3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcription antitermination protein nusG EMBL ABG60414.1

Gene names

Name:	nusG EMBL ABG60414.1
Ordered Locus Names:	CHU_3174

Organism

Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) [Complete proteome] [HAMAP] EMBL ABG60414.1

Taxonomic identifier

269798 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Cytophaga

Protein attributes

Sequence length	185 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function

Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 Transcription regulation Transcription termination SAAS SAAS006645
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q11QA0 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: D3FF7BE3C6E92B57	FASTA	185	20,722
	10 20 30 40 50 60 MSELHWYVVR AVSGQEKKVK SYLENEITRQ RLVDYVPQVL IPAEKVYEMR NGKKRVRERS 70 80 90 100 110 120 FFPGYVLIQA DLSHGEAAHV ITSIPGVLGF LGASEGAASK KPIPLRQSEV NRILGTVDDS 130 140 150 160 170 180 QVGEVVLETP FVVGETVKVM DGPFSGFTGS VEEVFEEKKK LNVMVKIFGR NTPVELNYIQ VEKLQ

References

[1]

"Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii." Xie G., Bruce D.C., Challacombe J.F., Chertkov O., Detter J.C., Gilna P., Han C.S., Lucas S., Misra M., Myers G.L., Richardson P., Tapia R., Thayer N., Thompson L.S., Brettin T.S., Henrissat B., Wilson D.B., McBride M.J. Appl. Environ. Microbiol. 73:3536-3546(2007) [PubMed: 17400776] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000383 Genomic DNA. Translation: ABG60414.1.
RefSeq	YP_679756.1. NC_008255.1.
3D structure databases
ProteinModelPortal	Q11QA0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q11QA0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4186100.
GenomeReviews	Gene locus CHU_3174 in contig CP000383_GR.
KEGG	chu:CHU_3174.
NMPDR	fig|269798.12.peg.3031.
PATRIC	21597217. VBICytHut34013_3158.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0250.
HOGENOM	HBG751162.
OMA	VASGCEK.
ProtClustDB	CLSK2398209.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR015869. Transcrpt_antiterm_NusG_bac_CS. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF00467. KOW. 1 hit. PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
PROSITE	PS01014. NUSG. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q11QA0_CYTH3

Accession

Primary (citable) accession number: Q11QA0

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)