Q11PP0 (Q11PP0_CYTH3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribosomal RNA small subunit methyltransferase I HAMAP MF_01877
EC=2.1.1.198 HAMAP MF_01877

Alternative name(s):
16S rRNA 2'-O-ribose C1402 methyltransferase HAMAP MF_01877
rRNA (cytidine-2'-O-)-methyltransferase RsmI HAMAP MF_01877

Gene names

Name:	yraL EMBL ABG60623.1
Synonyms:	rsmI HAMAP MF_01877
Ordered Locus Names:	CHU_3387

Organism

Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) [Complete proteome] [HAMAP] EMBL ABG60623.1

Taxonomic identifier

269798 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Cytophaga

Protein attributes

Sequence length	250 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA By similarity. HAMAP MF_01877
Catalytic activity	S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + 2'-O-methylcytosine(1402) in 16S rRNA. HAMAP MF_01877
Subcellular location	Cytoplasm By similarity HAMAP MF_01877.
Sequence similarities	Belongs to the methyltransferase superfamily. RsmI family. HAMAP MF_01877

Ontologies

Keywords
Biological process	rRNA processing HAMAP MF_01877
Cellular component	Cytoplasm HAMAP MF_01877
Ligand	S-adenosyl-L-methionine HAMAP MF_01877
Molecular function	Methyltransferase HAMAP MF_01877 EMBL ABG60623.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	enzyme-directed rRNA 2'-O-methylation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	rRNA (cytosine-2'-O-)-methyltransferase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q11PP0 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: E1188E5294DEE035	FASTA	250	27,824
	10 20 30 40 50 60 MNQTINTSGK LYLVPTPIGN LEDITLRAIR ILKEVDLVLA EDTRTSGNLL KHLAVQTKLQ 70 80 90 100 110 120 AFHAHNEHRA LQSTIQLLQQ GKNLALVSDA GTPGISDPGF LLVRECYVHN IPVECLPGPT 130 140 150 160 170 180 AFVPAIVKSG LPSDKFVFEG FLPHKKGRKT RIEKLMPEDR TIIFYESPYR LVKTLEQLRD 190 200 210 220 230 240 AFGADRQASV SRELTKMFEE TRNGSLEELA AHYTKHTPKG EIVLIVAGYN SKSDTLGNVD 250 EAYSEADDEE

References

[1]

"Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii." Xie G., Bruce D.C., Challacombe J.F., Chertkov O., Detter J.C., Gilna P., Han C.S., Lucas S., Misra M., Myers G.L., Richardson P., Tapia R., Thayer N., Thompson L.S., Brettin T.S., Henrissat B., Wilson D.B., McBride M.J. Appl. Environ. Microbiol. 73:3536-3546(2007) [PubMed: 17400776] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000383 Genomic DNA. Translation: ABG60623.1.
RefSeq	YP_679966.1. NC_008255.1.
3D structure databases
ProteinModelPortal	Q11PP0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q11PP0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4187176.
GenomeReviews	Gene locus CHU_3387 in contig CP000383_GR.
KEGG	chu:CHU_3387.
NMPDR	fig|269798.12.peg.3230.
PATRIC	21597653. VBICytHut34013_3371.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0313.
HOGENOM	HBG529058.
OMA	GREMTKI.
Family and domain databases
HAMAP	MF_01877. 16SrRNA_methyltr_I. [Tree]
InterPro	IPR000878. 4pyrrol_Mease. IPR014777. 4pyrrole_Mease_sub1. IPR008189. rRNA_ssu_MeTfrase_I. IPR018063. SAM_MeTrfase_RsmI_CS. [Graphical view]
Gene3D	G3DSA:3.40.1010.10. 4pyrrole_Mease_sub1. 1 hit.
KO	K07056.
PANTHER	PTHR21091:SF18. PTHR21091:SF18. 1 hit.
Pfam	PF00590. TP_methylase. 1 hit. [Graphical view]
PIRSF	PIRSF005917. MTase_YraL. 1 hit.
SUPFAM	SSF53790. Cor/por_Metransf. 1 hit.
TIGRFAMs	TIGR00096. TIGR00096. 1 hit.
PROSITE	PS01296. RSMI. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q11PP0_CYTH3

Accession

Primary (citable) accession number: Q11PP0

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)