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Q11PA6 (Q11PA6_CYTH3) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CHU_3524 EMBL ABG60757.1
OrganismCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) [Complete proteome] [HAMAP] EMBL ABG60757.1
Taxonomic identifier269798 [NCBI]
Taxonomic lineageBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga

Protein attributes

Sequence length538 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q11PA6 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 1C51F0839C1178ED

FASTA53861,470
        10         20         30         40         50         60 
MKKFAELFTE LDQTTRTNAK IDALADYFAV SDAADALWAV ALLTGKKPKR TVKTSELKLW 

        70         80         90        100        110        120 
SMELSGVNEW LFEESYHVVG DLAETITLLL PAAETQADYS LSGMMALLKT LDTKTEEQRK 

       130        140        150        160        170        180 
NIIQEIWMQL STAERFVFNK LITGSFRVGV SQQLVIKALA KNYKLVESNV AHRLMGNWLP 

       190        200        210        220        230        240 
DTSTLDNLLF NTDIQEDLSK PYPFYLAYQL DVPAETLGDI TAWQIEYKYD GIRGQIIVRR 

       250        260        270        280        290        300 
GELFVWSRGE ELMTDKFPEF ERLKEALPDG TVIDGEILPF NGNEPMPFHI MQTRIGRKNL 

       310        320        330        340        350        360 
SKKSLADAPL AMMCYDLLEY KGNDVRLLPM SERRALLENL LKELAEKNSA AAAVLKLSPV 

       370        380        390        400        410        420 
FVCKTVEEMV LLRLASRDRM CEGLMLKHKD SLYEAGRRRG KWWKWKIDPL TVDGVLLYAQ 

       430        440        450        460        470        480 
RGHGRRADLY TDYTFAVWSG EELVPFAKAY SGLTDKELVE VDNWVKKNTK EKFGPVRSVT 

       490        500        510        520        530 
PELVFEIAFE GINPSPRHKS GVALRFPRIL RWRKDKGIKD ANSKEDLLHL IQQLNRTA 

« Hide

References

[1]"Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii."
Xie G., Bruce D.C., Challacombe J.F., Chertkov O., Detter J.C., Gilna P., Han C.S., Lucas S., Misra M., Myers G.L., Richardson P., Tapia R., Thayer N., Thompson L.S., Brettin T.S., Henrissat B., Wilson D.B., McBride M.J.
Appl. Environ. Microbiol. 73:3536-3546(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 33406 / NCIMB 9469.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000383 Genomic DNA. Translation: ABG60757.1.
RefSeqYP_680100.1. NC_008255.1.

3D structure databases

ProteinModelPortalQ11PA6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269798.CHU_3524.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG60757; ABG60757; CHU_3524.
GeneID4183547.
KEGGchu:CHU_3524.
PATRIC21597921. VBICytHut34013_3505.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMAGQPYPFF.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycCHUT269798:GJ83-3517-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ11PA6_CYTH3
AccessionPrimary (citable) accession number: Q11PA6
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: November 13, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)