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Q11PA6

- Q11PA6_CYTH3

UniProt

Q11PA6 - Q11PA6_CYTH3

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

CHU_3524

Organism
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 55 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCHUT269798:GJ83-3517-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:CHU_3524Imported
    OrganismiCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)Imported
    Taxonomic identifieri269798 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga
    ProteomesiUP000001822: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi269798.CHU_3524.

    Structurei

    3D structure databases

    ProteinModelPortaliQ11PA6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiSEMRIVE.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q11PA6-1 [UniParc]FASTAAdd to Basket

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    MKKFAELFTE LDQTTRTNAK IDALADYFAV SDAADALWAV ALLTGKKPKR    50
    TVKTSELKLW SMELSGVNEW LFEESYHVVG DLAETITLLL PAAETQADYS 100
    LSGMMALLKT LDTKTEEQRK NIIQEIWMQL STAERFVFNK LITGSFRVGV 150
    SQQLVIKALA KNYKLVESNV AHRLMGNWLP DTSTLDNLLF NTDIQEDLSK 200
    PYPFYLAYQL DVPAETLGDI TAWQIEYKYD GIRGQIIVRR GELFVWSRGE 250
    ELMTDKFPEF ERLKEALPDG TVIDGEILPF NGNEPMPFHI MQTRIGRKNL 300
    SKKSLADAPL AMMCYDLLEY KGNDVRLLPM SERRALLENL LKELAEKNSA 350
    AAAVLKLSPV FVCKTVEEMV LLRLASRDRM CEGLMLKHKD SLYEAGRRRG 400
    KWWKWKIDPL TVDGVLLYAQ RGHGRRADLY TDYTFAVWSG EELVPFAKAY 450
    SGLTDKELVE VDNWVKKNTK EKFGPVRSVT PELVFEIAFE GINPSPRHKS 500
    GVALRFPRIL RWRKDKGIKD ANSKEDLLHL IQQLNRTA 538
    Length:538
    Mass (Da):61,470
    Last modified:August 22, 2006 - v1
    Checksum:i1C51F0839C1178ED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000383 Genomic DNA. Translation: ABG60757.1.
    RefSeqiYP_680100.1. NC_008255.1.

    Genome annotation databases

    EnsemblBacteriaiABG60757; ABG60757; CHU_3524.
    GeneIDi4183547.
    KEGGichu:CHU_3524.
    PATRICi21597921. VBICytHut34013_3505.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000383 Genomic DNA. Translation: ABG60757.1 .
    RefSeqi YP_680100.1. NC_008255.1.

    3D structure databases

    ProteinModelPortali Q11PA6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 269798.CHU_3524.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG60757 ; ABG60757 ; CHU_3524 .
    GeneIDi 4183547.
    KEGGi chu:CHU_3524.
    PATRICi 21597921. VBICytHut34013_3505.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi SEMRIVE.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci CHUT269798:GJ83-3517-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33406 / NCIMB 9469Imported.

    Entry informationi

    Entry nameiQ11PA6_CYTH3
    AccessioniPrimary (citable) accession number: Q11PA6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 55 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3