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Q11PA6

- Q11PA6_CYTH3

UniProt

Q11PA6 - Q11PA6_CYTH3

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

CHU_3524

Organism
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCHUT269798:GJ83-3517-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:CHU_3524Imported
OrganismiCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)Imported
Taxonomic identifieri269798 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga
ProteomesiUP000001822: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269798.CHU_3524.

Structurei

3D structure databases

ProteinModelPortaliQ11PA6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiSEMRIVE.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11PA6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKFAELFTE LDQTTRTNAK IDALADYFAV SDAADALWAV ALLTGKKPKR
60 70 80 90 100
TVKTSELKLW SMELSGVNEW LFEESYHVVG DLAETITLLL PAAETQADYS
110 120 130 140 150
LSGMMALLKT LDTKTEEQRK NIIQEIWMQL STAERFVFNK LITGSFRVGV
160 170 180 190 200
SQQLVIKALA KNYKLVESNV AHRLMGNWLP DTSTLDNLLF NTDIQEDLSK
210 220 230 240 250
PYPFYLAYQL DVPAETLGDI TAWQIEYKYD GIRGQIIVRR GELFVWSRGE
260 270 280 290 300
ELMTDKFPEF ERLKEALPDG TVIDGEILPF NGNEPMPFHI MQTRIGRKNL
310 320 330 340 350
SKKSLADAPL AMMCYDLLEY KGNDVRLLPM SERRALLENL LKELAEKNSA
360 370 380 390 400
AAAVLKLSPV FVCKTVEEMV LLRLASRDRM CEGLMLKHKD SLYEAGRRRG
410 420 430 440 450
KWWKWKIDPL TVDGVLLYAQ RGHGRRADLY TDYTFAVWSG EELVPFAKAY
460 470 480 490 500
SGLTDKELVE VDNWVKKNTK EKFGPVRSVT PELVFEIAFE GINPSPRHKS
510 520 530
GVALRFPRIL RWRKDKGIKD ANSKEDLLHL IQQLNRTA
Length:538
Mass (Da):61,470
Last modified:August 22, 2006 - v1
Checksum:i1C51F0839C1178ED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000383 Genomic DNA. Translation: ABG60757.1.
RefSeqiYP_680100.1. NC_008255.1.

Genome annotation databases

EnsemblBacteriaiABG60757; ABG60757; CHU_3524.
GeneIDi4183547.
KEGGichu:CHU_3524.
PATRICi21597921. VBICytHut34013_3505.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000383 Genomic DNA. Translation: ABG60757.1 .
RefSeqi YP_680100.1. NC_008255.1.

3D structure databases

ProteinModelPortali Q11PA6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 269798.CHU_3524.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG60757 ; ABG60757 ; CHU_3524 .
GeneIDi 4183547.
KEGGi chu:CHU_3524.
PATRICi 21597921. VBICytHut34013_3505.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi SEMRIVE.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci CHUT269798:GJ83-3517-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33406 / NCIMB 9469Imported.

Entry informationi

Entry nameiQ11PA6_CYTH3
AccessioniPrimary (citable) accession number: Q11PA6
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: October 1, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3