SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q11PA6

- Q11PA6_CYTH3

UniProt

Q11PA6 - Q11PA6_CYTH3

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: ATP-dependent DNA ligase
Gene
CHU_3524
Organism
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCHUT269798:GJ83-3517-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:CHU_3524Imported
OrganismiCytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)Imported
Taxonomic identifieri269798 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeCytophaga
ProteomesiUP000001822: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269798.CHU_3524.

Structurei

3D structure databases

ProteinModelPortaliQ11PA6.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiSEMRIVE.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11PA6-1 [UniParc]FASTAAdd to Basket

« Hide

MKKFAELFTE LDQTTRTNAK IDALADYFAV SDAADALWAV ALLTGKKPKR    50
TVKTSELKLW SMELSGVNEW LFEESYHVVG DLAETITLLL PAAETQADYS 100
LSGMMALLKT LDTKTEEQRK NIIQEIWMQL STAERFVFNK LITGSFRVGV 150
SQQLVIKALA KNYKLVESNV AHRLMGNWLP DTSTLDNLLF NTDIQEDLSK 200
PYPFYLAYQL DVPAETLGDI TAWQIEYKYD GIRGQIIVRR GELFVWSRGE 250
ELMTDKFPEF ERLKEALPDG TVIDGEILPF NGNEPMPFHI MQTRIGRKNL 300
SKKSLADAPL AMMCYDLLEY KGNDVRLLPM SERRALLENL LKELAEKNSA 350
AAAVLKLSPV FVCKTVEEMV LLRLASRDRM CEGLMLKHKD SLYEAGRRRG 400
KWWKWKIDPL TVDGVLLYAQ RGHGRRADLY TDYTFAVWSG EELVPFAKAY 450
SGLTDKELVE VDNWVKKNTK EKFGPVRSVT PELVFEIAFE GINPSPRHKS 500
GVALRFPRIL RWRKDKGIKD ANSKEDLLHL IQQLNRTA 538
Length:538
Mass (Da):61,470
Last modified:August 22, 2006 - v1
Checksum:i1C51F0839C1178ED
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000383 Genomic DNA. Translation: ABG60757.1.
RefSeqiYP_680100.1. NC_008255.1.

Genome annotation databases

EnsemblBacteriaiABG60757; ABG60757; CHU_3524.
GeneIDi4183547.
KEGGichu:CHU_3524.
PATRICi21597921. VBICytHut34013_3505.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000383 Genomic DNA. Translation: ABG60757.1 .
RefSeqi YP_680100.1. NC_008255.1.

3D structure databases

ProteinModelPortali Q11PA6.
ModBasei Search...

Protein-protein interaction databases

STRINGi 269798.CHU_3524.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG60757 ; ABG60757 ; CHU_3524 .
GeneIDi 4183547.
KEGGi chu:CHU_3524.
PATRICi 21597921. VBICytHut34013_3505.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi SEMRIVE.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci CHUT269798:GJ83-3517-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33406 / NCIMB 9469.

Entry informationi

Entry nameiQ11PA6_CYTH3
AccessioniPrimary (citable) accession number: Q11PA6
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi