Q11MD8 (Q11MD8_MESSB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABG61437.1

Gene names

Ordered Locus Names:

Meso_0032 EMBL ABG61437.1

Organism

Mesorhizobium sp. (strain BNC1) [Complete proteome] [HAMAP] EMBL ABG61437.1

Taxonomic identifier

266779 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Chelativorans

Protein attributes

Sequence length	536 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABG61437.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q11MD8 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 1E6560D86F4A0E52	FASTA	536	60,371
	10 20 30 40 50 60 MERFAELLDR LVLTPSRNGK LRLLTDYFAT VPDPDRGYGL AALTGGIGFP AVKPAMLRML 70 80 90 100 110 120 VMERVDPVLF GYSYDYVGDL AETVSLIWPA GENEEAEAPS LSEVVERLAQ ASRSDAPAVV 130 140 150 160 170 180 ARLLDQLSPS GRFAAIKLAT GGLRVGVSAR LTKQALADFG QVDVQEIEEL WHGLWPPYTE 190 200 210 220 230 240 LFAWLEKRGP KPENAAKAPF RPVMLAHAIE EADFANLKPA DYAAEWKWDG IRVQAVAEDG 250 260 270 280 290 300 VRRLYSRTGD DISGAFPDLA EAMDFEAALD GELLVGDPRE RTGTFSDLQQ RLNRKSVSQK 310 320 330 340 350 360 MLRDYPVFMR CYDVLSLGGR DTRPLAYAER RELLKEFLTT LPPDRFDLSP AISFETWEDL 370 380 390 400 410 420 DDKRCNPPHP IIEGVMLKRR DSHYLPGRPK GPWFKWKRDP FTVDAVLMYA QRGHGKRSSF 430 440 450 460 470 480 YSDYTFGVWA GPEEEPMLVP VGKAYFGFTD EELKQIDKYV RDNTTERFGP VRAVRADRNH 490 500 510 520 530 GLVLEVAFEG LARSTRHKSG IAMRFPRISR LRWDKPSREA DRIETLEAMI PKGAGA

References

[1]

"Complete sequence of chromosome of Mesorhizobium sp. BNC1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BNC1 EMBL ABG61437.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000390 Genomic DNA. Translation: ABG61437.1.
RefSeq	YP_672602.1. NC_008254.1.
3D structure databases
ProteinModelPortal	Q11MD8.
ModBase	Search...
Protein-protein interaction databases
STRING	266779.Meso_0032.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG61437; ABG61437; Meso_0032.
GeneID	4179476.
KEGG	mes:Meso_0032.
PATRIC	21339878. VBICheSp72577_0591.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	CSP266779:GI09-32-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q11MD8_MESSB

Accession

Primary (citable) accession number: Q11MD8

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	May 29, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)