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Q11MD8 (Q11MD8_CHESB) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Meso_0032 EMBL ABG61437.1
OrganismChelativorans sp. (strain BNC1) [Complete proteome] [HAMAP] EMBL ABG61437.1
Taxonomic identifier266779 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans

Protein attributes

Sequence length536 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q11MD8 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: 1E6560D86F4A0E52

FASTA53660,371
        10         20         30         40         50         60 
MERFAELLDR LVLTPSRNGK LRLLTDYFAT VPDPDRGYGL AALTGGIGFP AVKPAMLRML 

        70         80         90        100        110        120 
VMERVDPVLF GYSYDYVGDL AETVSLIWPA GENEEAEAPS LSEVVERLAQ ASRSDAPAVV 

       130        140        150        160        170        180 
ARLLDQLSPS GRFAAIKLAT GGLRVGVSAR LTKQALADFG QVDVQEIEEL WHGLWPPYTE 

       190        200        210        220        230        240 
LFAWLEKRGP KPENAAKAPF RPVMLAHAIE EADFANLKPA DYAAEWKWDG IRVQAVAEDG 

       250        260        270        280        290        300 
VRRLYSRTGD DISGAFPDLA EAMDFEAALD GELLVGDPRE RTGTFSDLQQ RLNRKSVSQK 

       310        320        330        340        350        360 
MLRDYPVFMR CYDVLSLGGR DTRPLAYAER RELLKEFLTT LPPDRFDLSP AISFETWEDL 

       370        380        390        400        410        420 
DDKRCNPPHP IIEGVMLKRR DSHYLPGRPK GPWFKWKRDP FTVDAVLMYA QRGHGKRSSF 

       430        440        450        460        470        480 
YSDYTFGVWA GPEEEPMLVP VGKAYFGFTD EELKQIDKYV RDNTTERFGP VRAVRADRNH 

       490        500        510        520        530 
GLVLEVAFEG LARSTRHKSG IAMRFPRISR LRWDKPSREA DRIETLEAMI PKGAGA 

« Hide

References

[1]"Complete sequence of chromosome of Mesorhizobium sp. BNC1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BNC1 EMBL ABG61437.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000390 Genomic DNA. Translation: ABG61437.1.
RefSeqYP_672602.1. NC_008254.1.

3D structure databases

ProteinModelPortalQ11MD8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266779.Meso_0032.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG61437; ABG61437; Meso_0032.
GeneID4179476.
KEGGmes:Meso_0032.
PATRIC21339878. VBICheSp72577_0591.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMARVWLWSR.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycCSP266779:GI09-32-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ11MD8_CHESB
AccessionPrimary (citable) accession number: Q11MD8
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: June 11, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)