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Q11MD8

- Q11MD8_CHESB

UniProt

Q11MD8 - Q11MD8_CHESB

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Meso_0032
Organism
Chelativorans sp. (strain BNC1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCSP266779:GI09-32-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Meso_0032Imported
OrganismiChelativorans sp. (strain BNC1)Imported
Taxonomic identifieri266779 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
ProteomesiUP000001820: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266779.Meso_0032.

Structurei

3D structure databases

ProteinModelPortaliQ11MD8.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11MD8-1 [UniParc]FASTAAdd to Basket

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MERFAELLDR LVLTPSRNGK LRLLTDYFAT VPDPDRGYGL AALTGGIGFP    50
AVKPAMLRML VMERVDPVLF GYSYDYVGDL AETVSLIWPA GENEEAEAPS 100
LSEVVERLAQ ASRSDAPAVV ARLLDQLSPS GRFAAIKLAT GGLRVGVSAR 150
LTKQALADFG QVDVQEIEEL WHGLWPPYTE LFAWLEKRGP KPENAAKAPF 200
RPVMLAHAIE EADFANLKPA DYAAEWKWDG IRVQAVAEDG VRRLYSRTGD 250
DISGAFPDLA EAMDFEAALD GELLVGDPRE RTGTFSDLQQ RLNRKSVSQK 300
MLRDYPVFMR CYDVLSLGGR DTRPLAYAER RELLKEFLTT LPPDRFDLSP 350
AISFETWEDL DDKRCNPPHP IIEGVMLKRR DSHYLPGRPK GPWFKWKRDP 400
FTVDAVLMYA QRGHGKRSSF YSDYTFGVWA GPEEEPMLVP VGKAYFGFTD 450
EELKQIDKYV RDNTTERFGP VRAVRADRNH GLVLEVAFEG LARSTRHKSG 500
IAMRFPRISR LRWDKPSREA DRIETLEAMI PKGAGA 536
Length:536
Mass (Da):60,371
Last modified:August 22, 2006 - v1
Checksum:i1E6560D86F4A0E52
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000390 Genomic DNA. Translation: ABG61437.1.
RefSeqiWP_011579380.1. NC_008254.1.
YP_672602.1. NC_008254.1.

Genome annotation databases

EnsemblBacteriaiABG61437; ABG61437; Meso_0032.
GeneIDi4179476.
KEGGimes:Meso_0032.
PATRICi21339878. VBICheSp72577_0591.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000390 Genomic DNA. Translation: ABG61437.1 .
RefSeqi WP_011579380.1. NC_008254.1.
YP_672602.1. NC_008254.1.

3D structure databases

ProteinModelPortali Q11MD8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266779.Meso_0032.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG61437 ; ABG61437 ; Meso_0032 .
GeneIDi 4179476.
KEGGi mes:Meso_0032.
PATRICi 21339878. VBICheSp72577_0591.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci CSP266779:GI09-32-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNC1Imported.

Entry informationi

Entry nameiQ11MD8_CHESB
AccessioniPrimary (citable) accession number: Q11MD8
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: September 3, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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