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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Meso_0032

Organism
Chelativorans sp. (strain BNC1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCSP266779:GI09-32-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Meso_0032Imported
OrganismiChelativorans sp. (strain BNC1)Imported
Taxonomic identifieri266779 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
ProteomesiUP000001820 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266779.Meso_0032.

Structurei

3D structure databases

ProteinModelPortaliQ11MD8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11MD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERFAELLDR LVLTPSRNGK LRLLTDYFAT VPDPDRGYGL AALTGGIGFP
60 70 80 90 100
AVKPAMLRML VMERVDPVLF GYSYDYVGDL AETVSLIWPA GENEEAEAPS
110 120 130 140 150
LSEVVERLAQ ASRSDAPAVV ARLLDQLSPS GRFAAIKLAT GGLRVGVSAR
160 170 180 190 200
LTKQALADFG QVDVQEIEEL WHGLWPPYTE LFAWLEKRGP KPENAAKAPF
210 220 230 240 250
RPVMLAHAIE EADFANLKPA DYAAEWKWDG IRVQAVAEDG VRRLYSRTGD
260 270 280 290 300
DISGAFPDLA EAMDFEAALD GELLVGDPRE RTGTFSDLQQ RLNRKSVSQK
310 320 330 340 350
MLRDYPVFMR CYDVLSLGGR DTRPLAYAER RELLKEFLTT LPPDRFDLSP
360 370 380 390 400
AISFETWEDL DDKRCNPPHP IIEGVMLKRR DSHYLPGRPK GPWFKWKRDP
410 420 430 440 450
FTVDAVLMYA QRGHGKRSSF YSDYTFGVWA GPEEEPMLVP VGKAYFGFTD
460 470 480 490 500
EELKQIDKYV RDNTTERFGP VRAVRADRNH GLVLEVAFEG LARSTRHKSG
510 520 530
IAMRFPRISR LRWDKPSREA DRIETLEAMI PKGAGA
Length:536
Mass (Da):60,371
Last modified:August 22, 2006 - v1
Checksum:i1E6560D86F4A0E52
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000390 Genomic DNA. Translation: ABG61437.1.
RefSeqiWP_011579380.1. NC_008254.1.

Genome annotation databases

EnsemblBacteriaiABG61437; ABG61437; Meso_0032.
KEGGimes:Meso_0032.
PATRICi21339878. VBICheSp72577_0591.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000390 Genomic DNA. Translation: ABG61437.1.
RefSeqiWP_011579380.1. NC_008254.1.

3D structure databases

ProteinModelPortaliQ11MD8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266779.Meso_0032.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABG61437; ABG61437; Meso_0032.
KEGGimes:Meso_0032.
PATRICi21339878. VBICheSp72577_0591.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK10747.
OMAiAAWAVYF.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciCSP266779:GI09-32-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNC1Imported.

Entry informationi

Entry nameiQ11MD8_CHESB
AccessioniPrimary (citable) accession number: Q11MD8
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: July 22, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.