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Q11MD8

- Q11MD8_CHESB

UniProt

Q11MD8 - Q11MD8_CHESB

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Meso_0032

Organism
Chelativorans sp. (strain BNC1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (22 Aug 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCSP266779:GI09-32-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Meso_0032Imported
    OrganismiChelativorans sp. (strain BNC1)Imported
    Taxonomic identifieri266779 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
    ProteomesiUP000001820: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi266779.Meso_0032.

    Structurei

    3D structure databases

    ProteinModelPortaliQ11MD8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiRVWLWSR.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q11MD8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MERFAELLDR LVLTPSRNGK LRLLTDYFAT VPDPDRGYGL AALTGGIGFP    50
    AVKPAMLRML VMERVDPVLF GYSYDYVGDL AETVSLIWPA GENEEAEAPS 100
    LSEVVERLAQ ASRSDAPAVV ARLLDQLSPS GRFAAIKLAT GGLRVGVSAR 150
    LTKQALADFG QVDVQEIEEL WHGLWPPYTE LFAWLEKRGP KPENAAKAPF 200
    RPVMLAHAIE EADFANLKPA DYAAEWKWDG IRVQAVAEDG VRRLYSRTGD 250
    DISGAFPDLA EAMDFEAALD GELLVGDPRE RTGTFSDLQQ RLNRKSVSQK 300
    MLRDYPVFMR CYDVLSLGGR DTRPLAYAER RELLKEFLTT LPPDRFDLSP 350
    AISFETWEDL DDKRCNPPHP IIEGVMLKRR DSHYLPGRPK GPWFKWKRDP 400
    FTVDAVLMYA QRGHGKRSSF YSDYTFGVWA GPEEEPMLVP VGKAYFGFTD 450
    EELKQIDKYV RDNTTERFGP VRAVRADRNH GLVLEVAFEG LARSTRHKSG 500
    IAMRFPRISR LRWDKPSREA DRIETLEAMI PKGAGA 536
    Length:536
    Mass (Da):60,371
    Last modified:August 22, 2006 - v1
    Checksum:i1E6560D86F4A0E52
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000390 Genomic DNA. Translation: ABG61437.1.
    RefSeqiWP_011579380.1. NC_008254.1.
    YP_672602.1. NC_008254.1.

    Genome annotation databases

    EnsemblBacteriaiABG61437; ABG61437; Meso_0032.
    GeneIDi4179476.
    KEGGimes:Meso_0032.
    PATRICi21339878. VBICheSp72577_0591.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000390 Genomic DNA. Translation: ABG61437.1 .
    RefSeqi WP_011579380.1. NC_008254.1.
    YP_672602.1. NC_008254.1.

    3D structure databases

    ProteinModelPortali Q11MD8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266779.Meso_0032.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABG61437 ; ABG61437 ; Meso_0032 .
    GeneIDi 4179476.
    KEGGi mes:Meso_0032.
    PATRICi 21339878. VBICheSp72577_0591.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi RVWLWSR.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci CSP266779:GI09-32-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BNC1Imported.

    Entry informationi

    Entry nameiQ11MD8_CHESB
    AccessioniPrimary (citable) accession number: Q11MD8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 22, 2006
    Last sequence update: August 22, 2006
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3