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Q11J79

- Q11J79_CHESB

UniProt

Q11J79 - Q11J79_CHESB

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Protein
Submitted name:

ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module

Gene
Meso_1150
Organism
Chelativorans sp. (strain BNC1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCSP266779:GI09-1168-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase moduleImported
Gene namesi
Ordered Locus Names:Meso_1150Imported
OrganismiChelativorans sp. (strain BNC1)Imported
Taxonomic identifieri266779 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
ProteomesiUP000001820: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266779.Meso_1150.

Structurei

3D structure databases

ProteinModelPortaliQ11J79.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q11J79-1 [UniParc]FASTAAdd to Basket

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MALTTYRRKR NFSATPEPPG EEKASPRGDS FVIQKHAARR LHYDLRLEMD    50
GVLKSWAVTR GPSLVPGEKR LAVHVEDHPL DYGDFEGTIP KGEYGGGTVI 100
VWDRGSWSPI GDAKKGYAKG HLEFELHGEK LTGRWHLVRM AKKPREKKEN 150
WLLIKGEDDA ARSEADPDIL EERPESVKTG RVIEEVEGEA PGWSSKTGRI 200
EQPAEAKPAR KKRATKAGSE KSAGEKISVP KRAKKAGYPG FIEPALATLR 250
STPPPGGRWL HEIKFDGYRL QAHIRDGKAR LLTRSGLDWT EKFGDAIVTA 300
LGSLPVRQAI MDGELIVEGA GGASDFSALQ AALSEGRVDR MALYLFDLLY 350
LDGYDFRPVP LAERKATLQK LLDGAPPVLR YSEHFEEDGE LVFRHACRLS 400
LEGIVSKAGD AAYRSGRGKD WIKSKCSMRQ EFVVAGYVPS TTSNRAIGSL 450
VLGYYENERL IYAGRVGTGF SHALAQDLFK RLDKMRIAKS PFAKKLTSEE 500
ARGAKFVRPE LVAEVEFRTW TADNLIRHAS FRGLREDKSA TDVTRETNQS 550
KPAERAAPAI RLTHPDRIYW KDAGVTKQGL SDYYAEVWPR MGPFIVNRPL 600
ALVRCPDGVE GQCFFQKHAW RGQSHEIMKA VDPEDDEPII AIDGLPGLIG 650
LVQGGTLEIH PWGSQLEDLE RPDLINMDLD PGPDVTWQDV IDAAREVRER 700
LAQAGLESFV KTSGGKGLHV VAPLKPRADW PEVKAFAKGI ADAMASDTPE 750
RFVATVTKAK RKGKILVDYL RNGRGATAVA PYSTRARAGA AVSMPLFWEE 800
LSPAITADYF TVANAPTRLA AIGKDPWEDF WRAAVPLGRK ARRAA 845
Length:845
Mass (Da):93,528
Last modified:August 22, 2006 - v1
Checksum:iF03B77FC10FAFC6A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000390 Genomic DNA. Translation: ABG62546.1.
RefSeqiWP_011580489.1. NC_008254.1.
YP_673711.1. NC_008254.1.

Genome annotation databases

EnsemblBacteriaiABG62546; ABG62546; Meso_1150.
GeneIDi4180741.
KEGGimes:Meso_1150.
PATRICi21342274. VBICheSp72577_1773.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000390 Genomic DNA. Translation: ABG62546.1 .
RefSeqi WP_011580489.1. NC_008254.1.
YP_673711.1. NC_008254.1.

3D structure databases

ProteinModelPortali Q11J79.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266779.Meso_1150.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG62546 ; ABG62546 ; Meso_1150 .
GeneIDi 4180741.
KEGGi mes:Meso_1150.
PATRICi 21342274. VBICheSp72577_1773.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci CSP266779:GI09-1168-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNC1Imported.

Entry informationi

Entry nameiQ11J79_CHESB
AccessioniPrimary (citable) accession number: Q11J79
Entry historyi
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: September 3, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3