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Q11J79 (Q11J79_CHESB) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Meso_1150 EMBL ABG62546.1
OrganismChelativorans sp. (strain BNC1) [Complete proteome] [HAMAP] EMBL ABG62546.1
Taxonomic identifier266779 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans

Protein attributes

Sequence length845 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q11J79 [UniParc].

Last modified August 22, 2006. Version 1.
Checksum: F03B77FC10FAFC6A

FASTA84593,528
        10         20         30         40         50         60 
MALTTYRRKR NFSATPEPPG EEKASPRGDS FVIQKHAARR LHYDLRLEMD GVLKSWAVTR 

        70         80         90        100        110        120 
GPSLVPGEKR LAVHVEDHPL DYGDFEGTIP KGEYGGGTVI VWDRGSWSPI GDAKKGYAKG 

       130        140        150        160        170        180 
HLEFELHGEK LTGRWHLVRM AKKPREKKEN WLLIKGEDDA ARSEADPDIL EERPESVKTG 

       190        200        210        220        230        240 
RVIEEVEGEA PGWSSKTGRI EQPAEAKPAR KKRATKAGSE KSAGEKISVP KRAKKAGYPG 

       250        260        270        280        290        300 
FIEPALATLR STPPPGGRWL HEIKFDGYRL QAHIRDGKAR LLTRSGLDWT EKFGDAIVTA 

       310        320        330        340        350        360 
LGSLPVRQAI MDGELIVEGA GGASDFSALQ AALSEGRVDR MALYLFDLLY LDGYDFRPVP 

       370        380        390        400        410        420 
LAERKATLQK LLDGAPPVLR YSEHFEEDGE LVFRHACRLS LEGIVSKAGD AAYRSGRGKD 

       430        440        450        460        470        480 
WIKSKCSMRQ EFVVAGYVPS TTSNRAIGSL VLGYYENERL IYAGRVGTGF SHALAQDLFK 

       490        500        510        520        530        540 
RLDKMRIAKS PFAKKLTSEE ARGAKFVRPE LVAEVEFRTW TADNLIRHAS FRGLREDKSA 

       550        560        570        580        590        600 
TDVTRETNQS KPAERAAPAI RLTHPDRIYW KDAGVTKQGL SDYYAEVWPR MGPFIVNRPL 

       610        620        630        640        650        660 
ALVRCPDGVE GQCFFQKHAW RGQSHEIMKA VDPEDDEPII AIDGLPGLIG LVQGGTLEIH 

       670        680        690        700        710        720 
PWGSQLEDLE RPDLINMDLD PGPDVTWQDV IDAAREVRER LAQAGLESFV KTSGGKGLHV 

       730        740        750        760        770        780 
VAPLKPRADW PEVKAFAKGI ADAMASDTPE RFVATVTKAK RKGKILVDYL RNGRGATAVA 

       790        800        810        820        830        840 
PYSTRARAGA AVSMPLFWEE LSPAITADYF TVANAPTRLA AIGKDPWEDF WRAAVPLGRK 


ARRAA 

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References

[1]"Complete sequence of chromosome of Mesorhizobium sp. BNC1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.
Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BNC1 EMBL ABG62546.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000390 Genomic DNA. Translation: ABG62546.1.
RefSeqYP_673711.1. NC_008254.1.

3D structure databases

ProteinModelPortalQ11J79.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266779.Meso_1150.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABG62546; ABG62546; Meso_1150.
GeneID4180741.
KEGGmes:Meso_1150.
PATRIC21342274. VBICheSp72577_1773.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASACDMAL.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycCSP266779:GI09-1168-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ11J79_CHESB
AccessionPrimary (citable) accession number: Q11J79
Entry history
Integrated into UniProtKB/TrEMBL: August 22, 2006
Last sequence update: August 22, 2006
Last modified: June 11, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)