Q11HL9 (Q11HL9_MESSB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNAse E EMBL ABG63106.1
EC=3.1.4.- EMBL ABG63106.1

Gene names

Ordered Locus Names:

Meso_1711 EMBL ABG63106.1

Organism

Mesorhizobium sp. (strain BNC1) [Complete proteome] [HAMAP] EMBL ABG63106.1

Taxonomic identifier

266779 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Phyllobacteriaceae › Chelativorans

Protein attributes

Sequence length	868 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABG63106.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	RNA processing Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q11HL9 [UniParc]. Last modified August 22, 2006. Version 1. Checksum: 7A1B8DE12EAA5092	FASTA	868	95,963
	10 20 30 40 50 60 MPNKMLIDAS HPEETRVVVL RGNRIEEFDF ESQDKKQLRG NIYLARVTRV EPSLQAAFVE 70 80 90 100 110 120 YGGNRHGFLA FSEIHPDYYQ IPVADRQALL EAEAEEARAA DEAEEGEAQA GRGRKRRRRD 130 140 150 160 170 180 AKTDEVVSEG KDVAQPEAVR DDTVSEPLAA DGNGSDEANG SDEVDTVGAE DALDEAQNRR 190 200 210 220 230 240 RPVRRNYKIQ EVIKRRQIML VQVVKEERGS KGAALTTYLS LAGRYSVLMP NTARGGGISR 250 260 270 280 290 300 KITNLQDRKR LKEVVKGLDV PEGMGVILRT AGANRTKAEI KRDYEYLMRL WERVRTLTLE 310 320 330 340 350 360 SIAPALVYEE GSLIKRAVRD LYNKDIDEIL VAGEDGYREA KDFMRMLMPS HAKAVQPYRD 370 380 390 400 410 420 SVPIFARNGI EAQLDKMLQP QVTLKSGGYI IINQTEALVA IDVNSGRSTK EHSIEDTALQ 430 440 450 460 470 480 TNLEAAEEIS RQLRLRDLAG LIVIDFIDME ENRNNRAVEK RLKECLKSDR ARIQVGRISH 490 500 510 520 530 540 FGLLEMSRQR IRSSVLESTM QPCPHCGGTG HVRSDSSVAL LVVRAIEEYL LKDGRHDITV 550 560 570 580 590 600 RTPTSTALYL LNHKRATLVE MESRFGVEIT IETDEELGTQ HYAIVKGQPS TRVPASRAVV 610 620 630 640 650 660 QAVPEVEDEA EEETYVEETE ELEEKQTAAE EPGGPGRKRR RRRRRRGGKD RAAEQAAPHS 670 680 690 700 710 720 AVTEEISEPA AETGEADLTA AETEAEAADV EAGDGGPRKK RHRGKRGGKR NRRDEEAAPE 730 740 750 760 770 780 DAVTAQSEEP AGEIQAEAAS EAVSSEAAAA TSEAAAAEAE PVAEVSAEEV VVEEKPAKKP 790 800 810 820 830 840 RRKTRAKKDA AADEIAQPAP VAQDEEPAPA APTVEALVED KPEDKPSKPS RRTAANTSEK 850 860 PKPVVTSTGE SGEAPARKTG WWQRKSFF

References

[1]

"Complete sequence of chromosome of Mesorhizobium sp. BNC1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BNC1 EMBL ABG63106.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000390 Genomic DNA. Translation: ABG63106.1.
RefSeq	YP_674271.1. NC_008254.1.
3D structure databases
ProteinModelPortal	Q11HL9.
ModBase	Search...
Protein-protein interaction databases
STRING	266779.Meso_1711.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABG63106; ABG63106; Meso_1711.
GeneID	4181341.
KEGG	mes:Meso_1711.
PATRIC	21343478. VBICheSp72577_2367.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1530.
HOGENOM	HOG000258026.
KO	K08300.
OMA	MGIILRT.
ProtClustDB	CLSK505190.
Enzyme and pathway databases
BioCyc	CSP266779:GI09-1738-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 2 hits.
InterPro	IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR019307. RNA-bd_AU-1/RNase_E/G. IPR022967. RNA-binding_domain_S1. IPR004659. RNase_E/G. IPR001878. Znf_CCHC. [Graphical view]
Pfam	PF10150. RNase_E_G. 1 hit. PF00575. S1. 1 hit. [Graphical view]
SMART	SM00316. S1. 1 hit. SM00343. ZnF_C2HC. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00757. RNaseEG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q11HL9_MESSB

Accession

Primary (citable) accession number: Q11HL9

Entry history

Integrated into UniProtKB/TrEMBL:	August 22, 2006
Last sequence update:	August 22, 2006
Last modified:	May 29, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)