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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Chelativorans sp. (strain BNC1)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei417NucleophileUniRule annotation1
Active sitei470Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferase, Transferase
Biological processCarbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

UniPathwayiUPA00164

Protein family/group databases

CAZyiCBM48 Carbohydrate-Binding Module Family 48
GH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:Meso_2677
OrganismiChelativorans sp. (strain BNC1)
Taxonomic identifieri266779 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
Proteomesi
  • UP000001820 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002606651 – 7381,4-alpha-glucan branching enzyme GlgBAdd BLAST738

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi266779.Meso_2677

Structurei

3D structure databases

ProteinModelPortaliQ11EX1
SMRiQ11EX1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C9C Bacteria
COG0296 LUCA
HOGENOMiHOG000283037
KOiK00700
OMAiEVVHGKS
OrthoDBiPOG091H08D1

Family and domain databases

Gene3Di2.60.40.10, 1 hit
2.60.40.1180, 1 hit
HAMAPiMF_00685 GlgB, 1 hit
InterProiView protein in InterPro
IPR006048 A-amylase/branching_C
IPR037439 Branching_enzy
IPR006407 GlgB
IPR006047 Glyco_hydro_13_cat_dom
IPR004193 Glyco_hydro_13_N
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
PANTHERiPTHR43651 PTHR43651, 1 hit
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF02806 Alpha-amylase_C, 1 hit
PF02922 CBM_48, 1 hit
PIRSFiPIRSF000463 GlgB, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
SSF81296 SSF81296, 2 hits
TIGRFAMsiTIGR01515 branching_enzym, 1 hit

Sequencei

Sequence statusi: Complete.

Q11EX1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAAADAAPW RLDDPHVIGA LVAGRLADPF AILGPHQTAA GLVLRVLRPE
60 70 80 90 100
ADTAEAIDPD SGSSYGKLLK RHARGFFEGL ISKNTAVPRY RLRFTREGDT
110 120 130 140 150
WDEEDAYRFP STFGDLDLYL LGEGRHQRLY EKLGAHPMAC DGVDGTRFAV
160 170 180 190 200
WAPNASRVSV VGNFNNWDGR RHQMRLHPGI GVWEIFVPGA KPGNLYKYEI
210 220 230 240 250
IGRNGELLPP KADPVGFRAE VPPATASVVN GLPQMEWGDG EWVEHRIGKN
260 270 280 290 300
DRKAPISIYE VHLGSWRRHE DGRYLSYDEL ADRLLPYVKD LGFTHIECMP
310 320 330 340 350
VSEHPFSGSW GYQPVGLYAP TSRFGTPEDF ARFVDRCHHE GIGVIIDWVP
360 370 380 390 400
AHFPSDAHGL ARFDGTALYE HEDPRLGFHR DWNTLIYNFG RREVANFLTA
410 420 430 440 450
NALFWLDRYH VDGLRVDAVA SMLYLDYSRQ PGEWIPNKHG GNENLEAIAF
460 470 480 490 500
LRETNTALFG SHPGTTSIAE ESTAFPGVSR PVYAGGLGFG FKWNMGWMHD
510 520 530 540 550
TLDYMQHEPI HRQHHHDRMT FGLIYAFSEN FILPLSHDEV VHGKGSLIGR
560 570 580 590 600
MPGDRWQKFA NLRAYFTFMW THPGKKLLFM GGEFAQEREW NHDWQLDWHH
610 620 630 640 650
LDDPMHRGVH DLIRDLNRIY RSEPALHELD CEPEGFEWID ASDPSISTYV
660 670 680 690 700
YMRKGTGGAR PVVVACNFTP VVRENFRIGL PNAGIWREIL NSDDRRYGGS
710 720 730
DVTNGTVTAT TDEPWHGRPA SAILRLPPLG SVVLVGEA
Length:738
Mass (Da):83,352
Last modified:August 22, 2006 - v1
Checksum:i77E77E87E73DE2E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000390 Genomic DNA Translation: ABG64054.1
RefSeqiWP_011581995.1, NC_008254.1

Genome annotation databases

EnsemblBacteriaiABG64054; ABG64054; Meso_2677
KEGGimes:Meso_2677

Similar proteinsi

Entry informationi

Entry nameiGLGB_CHESB
AccessioniPrimary (citable) accession number: Q11EX1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 22, 2006
Last modified: March 28, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

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