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Q11EX1

- GLGB_CHESB

UniProt

Q11EX1 - GLGB_CHESB

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene
glgB, Meso_2677
Organism
Chelativorans sp. (strain BNC1)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei417 – 4171Nucleophile By similarity
Active sitei470 – 4701Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciCSP266779:GI09-2722-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:Meso_2677
OrganismiChelativorans sp. (strain BNC1)
Taxonomic identifieri266779 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesPhyllobacteriaceaeChelativorans
ProteomesiUP000001820: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7387381,4-alpha-glucan branching enzyme GlgBUniRule annotationPRO_0000260665Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi266779.Meso_2677.

Structurei

3D structure databases

ProteinModelPortaliQ11EX1.
SMRiQ11EX1. Positions 125-738.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiISEGRHE.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q11EX1-1 [UniParc]FASTAAdd to Basket

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MSAAADAAPW RLDDPHVIGA LVAGRLADPF AILGPHQTAA GLVLRVLRPE    50
ADTAEAIDPD SGSSYGKLLK RHARGFFEGL ISKNTAVPRY RLRFTREGDT 100
WDEEDAYRFP STFGDLDLYL LGEGRHQRLY EKLGAHPMAC DGVDGTRFAV 150
WAPNASRVSV VGNFNNWDGR RHQMRLHPGI GVWEIFVPGA KPGNLYKYEI 200
IGRNGELLPP KADPVGFRAE VPPATASVVN GLPQMEWGDG EWVEHRIGKN 250
DRKAPISIYE VHLGSWRRHE DGRYLSYDEL ADRLLPYVKD LGFTHIECMP 300
VSEHPFSGSW GYQPVGLYAP TSRFGTPEDF ARFVDRCHHE GIGVIIDWVP 350
AHFPSDAHGL ARFDGTALYE HEDPRLGFHR DWNTLIYNFG RREVANFLTA 400
NALFWLDRYH VDGLRVDAVA SMLYLDYSRQ PGEWIPNKHG GNENLEAIAF 450
LRETNTALFG SHPGTTSIAE ESTAFPGVSR PVYAGGLGFG FKWNMGWMHD 500
TLDYMQHEPI HRQHHHDRMT FGLIYAFSEN FILPLSHDEV VHGKGSLIGR 550
MPGDRWQKFA NLRAYFTFMW THPGKKLLFM GGEFAQEREW NHDWQLDWHH 600
LDDPMHRGVH DLIRDLNRIY RSEPALHELD CEPEGFEWID ASDPSISTYV 650
YMRKGTGGAR PVVVACNFTP VVRENFRIGL PNAGIWREIL NSDDRRYGGS 700
DVTNGTVTAT TDEPWHGRPA SAILRLPPLG SVVLVGEA 738
Length:738
Mass (Da):83,352
Last modified:August 22, 2006 - v1
Checksum:i77E77E87E73DE2E6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000390 Genomic DNA. Translation: ABG64054.1.
RefSeqiWP_011581995.1. NC_008254.1.
YP_675219.1. NC_008254.1.

Genome annotation databases

EnsemblBacteriaiABG64054; ABG64054; Meso_2677.
GeneIDi4180240.
KEGGimes:Meso_2677.
PATRICi21345580. VBICheSp72577_3404.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000390 Genomic DNA. Translation: ABG64054.1 .
RefSeqi WP_011581995.1. NC_008254.1.
YP_675219.1. NC_008254.1.

3D structure databases

ProteinModelPortali Q11EX1.
SMRi Q11EX1. Positions 125-738.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266779.Meso_2677.

Protein family/group databases

CAZyi CBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABG64054 ; ABG64054 ; Meso_2677 .
GeneIDi 4180240.
KEGGi mes:Meso_2677.
PATRICi 21345580. VBICheSp72577_3404.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ISEGRHE.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci CSP266779:GI09-2722-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BNC1.

Entry informationi

Entry nameiGLGB_CHESB
AccessioniPrimary (citable) accession number: Q11EX1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: August 22, 2006
Last modified: September 3, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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